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contig_metadata

21 rows where bioproject = "PRJNA753704", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 21 ✖

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA753704 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2007205 2007205 PRJNA753704_P_NODE_6242_length_460_cov_4.387597_g5881_i0 PRJNA753704 6242 460 4.387597 20.1829462 Paramoeba branchiphila 308475 Discosea other_Eukaryota 305 3.1e-78   NTclustered gi|226347442|gb|FJ807261.1| 308475 g5881 i0 78.901 72.795652173913 455 90 98 6 9 460 515 966 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 33486 305 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
2007233 2007233 PRJNA753704_P_NODE_9262_length_385_cov_1.839744_g8901_i0 PRJNA753704 9262 385 1.839744 7.0830144 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 121 9.93e-23   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g8901 i0 74.052 15.587012987013 343 68 87 18 52 385 32816 32486 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 6001 121 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
10935021 10935021 PRJNA753704_P_NODE_17409_length_289_cov_1.444444_g17048_i0 PRJNA753704 17409 289 1.444444 4.17444316 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 133 1.09e-33   NR XP_004341420.1 1257118 g17048 i0 69.9 0.965397923875433 93 28 96.5 0 1 279 173 265 XP_004341420.1 vacuolar sorting protein, putative [Acanthamoeba castellanii str. Neff] diamond 279 133 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16033780 16033780 PRJNA753704_P_NODE_3033_length_638_cov_2.596460_g2680_i0 PRJNA753704 3033 638 2.59646 16.5654148 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 182 7.75e-41   NTclustered gi|28194599|gb|AF479543.1| 5757 g2680 i0 73.045 16.1520376175549 601 128 91 28 56 638 235 819 Acanthamoeba polyphaga strain Sawyer CCAP 1501/3C 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 10305 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
17309216 17309216 PRJNA753704_P_NODE_24974_length_249_cov_3.522727_g24613_i0 PRJNA753704 24974 249 3.522727 8.77159023 Clydonella sawyeri 2201168 Discosea other_Eukaryota 162 1.4899999999999999e-46   NR AWP39919.1 2201168 g24613 i0 89 0.987951807228916 82 9 98.8 0 3 248 86 167 AWP39919.1 cytochrome b [Clydonella sawyeri] diamond 246 162 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Clydonella Clydonella sawyeri
17309326 17309326 PRJNA753704_P_NODE_6934_length_439_cov_7.765027_g6573_i0 PRJNA753704 6934 439 7.765027 34.08846853 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 91.6 8.99e-14   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g6573 i0 73.065 10.9703872437358 323 61 71 16 1 312 14255 14562 Paramoeba aparasomata mitochondrion, complete genome blastn 4816 91.6 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
18582810 18582810 PRJNA753704_P_NODE_12575_length_335_cov_1.908397_g12214_i0 PRJNA753704 12575 335 1.908397 6.39312995 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 4.88e-36   NR XP_004337603.1 1257118 g12214 i0 68.3 8.35522388059701 101 31 90.4 1 308 6 74 173 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 2799 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21133727 21133727 PRJNA753704_P_NODE_5957_length_470_cov_2.294710_g5596_i0 PRJNA753704 5957 470 2.29471 10.785137 Paravannella minima 1443144 Discosea other_Eukaryota 179 1.2099999999999997e-52   NR YP_009557771.1 1443144 g5596 i0 51.9 1.99148936170213 156 75 99.6 0 469 2 70 225 YP_009557771.1 cytochrome oxidase subunit 3 [Paravannella minima] diamond 936 179 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
26704498 26704498 PRJNA753704_P_NODE_18581_length_281_cov_1.149038_g18220_i0 PRJNA753704 18581 281 1.149038 3.22879678 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 2.3499999999999997e-35   NR XP_004336278.1 1257118 g18220 i0 76.3 1.98576512455516 93 21 99.3 1 279 1 312 403 XP_004336278.1 Proteasome/cyclosome repeat containing protein [Acanthamoeba castellanii str. Neff] diamond 558 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27021290 27021290 PRJNA753704_P_NODE_26082_length_247_cov_0.896552_g25721_i0 PRJNA753704 26082 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 140 1.6e-38   NR XP_004338019.1 1257118 g25721 i0 80.5 0.995951417004049 82 16 99.6 0 246 1 152 233 XP_004338019.1 shortchain dehydrogenase/reductase SDR, putative [Acanthamoeba castellanii str. Neff] diamond 246 140 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27179144 27179144 PRJNA753704_P_NODE_24202_length_251_cov_1.752809_g23841_i0 PRJNA753704 24202 251 1.752809 4.39955059 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.9 5.08e-21   NR XP_004342296.1 1257118 g23841 i0 51.3 2.91633466135458 80 39 95.6 0 245 6 338 417 XP_004342296.1 carboxypeptidase Ylike protein [Acanthamoeba castellanii str. Neff] diamond 732 95.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27400692 27400692 PRJNA753704_P_NODE_27863_length_243_cov_0.917647_g27502_i0 PRJNA753704 27863 243 0.917647 2.22988221 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 1.83e-36   NR XP_004333102.1 1257118 g27502 i0 74.1 6 81 21 100 0 243 1 45 125 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 1458 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27432395 27432395 PRJNA753704_P_NODE_25123_length_249_cov_1.125000_g24762_i0 PRJNA753704 25123 249 1.125 2.80125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 112 1.6700000000000002e-26   NR XP_004347147.1 1257118 g24762 i0 61 0.987951807228916 82 31 98.8 1 2 247 264 344 XP_004347147.1 transketolase, putative [Acanthamoeba castellanii str. Neff] diamond 246 112 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27505324 27505324 PRJNA753704_P_NODE_15483_length_305_cov_1.077586_g15122_i0 PRJNA753704 15483 305 1.077586 3.2866373 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.9 5.96e-10   NR XP_004336519.1 1257118 g15122 i0 35.2 3.5016393442623 88 56 85.6 1 3 263 422 509 XP_004336519.1 leucine rich repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 1068 65.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28505643 28505643 PRJNA753704_P_NODE_11107_length_355_cov_1.656028_g10746_i0 PRJNA753704 11107 355 1.656028 5.8788994 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 1.2799999999999998e-35   NR XP_004342497.1 1257118 g10746 i0 58.1 0.988732394366197 117 47 98 2 351 4 31 146 XP_004342497.1 uncharacterized protein ACA1_027500 [Acanthamoeba castellanii str. Neff] diamond 351 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28884462 28884462 PRJNA753704_P_NODE_24848_length_250_cov_0.881356_g24487_i0 PRJNA753704 24848 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77 3.36e-14   NR XP_004336068.1 1257118 g24487 i0 64.6 0.78 65 23 78 0 248 54 302 366 XP_004336068.1 kinesin motor domain containing protein [Acanthamoeba castellanii str. Neff] diamond 195 77 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29989749 29989749 PRJNA753704_P_NODE_11631_length_347_cov_3.040146_g11270_i0 PRJNA753704 11631 347 3.040146 10.54930662 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 159 4.61e-46   NR XP_004367925.1 1257118 g11270 i0 74.3 0.907780979827089 105 27 90.8 0 31 345 1 105 XP_004367925.1 ribosomal protein S8e, putative [Acanthamoeba castellanii str. Neff] diamond 315 159 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30115984 30115984 PRJNA753704_P_NODE_25312_length_249_cov_0.886364_g24951_i0 PRJNA753704 25312 249 0.886364 2.20704636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.9 1.87e-15   NR XP_004342303.1 1257118 g24951 i0 43.6 0.939759036144578 78 44 94 0 239 6 39 116 XP_004342303.1 transcription factor pcc1 protein [Acanthamoeba castellanii str. Neff] diamond 234 75.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30937721 30937721 PRJNA753704_P_NODE_23954_length_252_cov_0.871508_g23593_i0 PRJNA753704 23954 252 0.871508 2.19620016 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52 2.14e-5   NR XP_004353576.1 1257118 g23593 i0 41.4 3.5952380952381 58 34 69 0 2 175 109 166 XP_004353576.1 leucine rich repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 906 52 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32487553 32487553 PRJNA753704_P_NODE_8059_length_410_cov_3.038576_g7698_i0 PRJNA753704 8059 410 3.038576 12.4581616 Paravannella minima 1443144 Discosea other_Eukaryota 156 1.6199999999999999e-46   NR YP_009557803.1 1443144 g7698 i0 67.5 0.834146341463415 114 37 83.4 0 67 408 5 118 YP_009557803.1 NADH dehydrogenase subunit 3 [Paravannella minima] diamond 342 156 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
32582372 32582372 PRJNA753704_P_NODE_21879_length_261_cov_1.659574_g21518_i0 PRJNA753704 21879 261 1.659574 4.33148814 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.8 6.35e-9   NR XP_004339669.1 1257118 g21518 i0 67.3 0.563218390804598 49 14 56.3 2 2 148 154 200 XP_004339669.1 Rasrelated protein Rac1, putative [Acanthamoeba castellanii str. Neff] diamond 147 60.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;