RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA753151" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA753151 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16032078 16032078 PRJNA753151_S_NODE_124913_length_257_cov_10.532710_g122623_i0 PRJNA753151 124913 257 10.53271 27.0690647 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g122623 i0 100 0.22568093385214 30 0 12 0 228 257 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
22408161 22408161 PRJNA753151_S_NODE_63478_length_334_cov_6.821306_g61188_i0 PRJNA753151 63478 334 6.821306 22.78316204 Gammaarterivirus lacdeh 2499678 Viruses Viruses 496 1.21e-135   NTclustered gi|233622|gb|S50060.1| 11048 g61188 i0 93.656 12.748502994012 331 21 99 0 4 334 407 77 VP-1=nucleocapsid protein [lactate dehydrogenase-elevating virus, LDV-P isolate, mRNA, 437 nt] blastn 4258 496 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Arteriviridae Gammaarterivirus Gammaarterivirus lacdeh

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;