RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA753151", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA753151 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2005607 2005607 PRJNA753151_S_NODE_150722_length_236_cov_5.186528_g148432_i0 PRJNA753151 150722 236 5.186528 12.24020608 uncultured Paraglomus 231236 Fungi Fungi 436 4.999999999999999e-118   NTclustered gi|2024769753|gb|MW900421.1| 231236 g148432 i0 100 99.9915254237288 236 0 100 0 1 236 415 180 Uncultured Paraglomus isolate 43-Clara VTX00444 small subunit ribosomal RNA gene, partial sequence blastn 23598 436 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales     uncultured Paraglomus
22407074 22407074 PRJNA753151_S_NODE_166758_length_225_cov_2.225275_g164468_i0 PRJNA753151 166758 225 2.225275 5.00686875 Mucor mucedo 29922 Fungi Fungi 180 8.8e-41   NTclustered gi|2324030908|ref|XM_051604722.1| 29922 g164468 i0 84.211 2.22666666666667 190 24 83 4 32 218 200 386 Mucor mucedo 40S ribosomal protein S20 (EV154DRAFT_546955), partial mRNA blastn 501 180 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;