RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA753151", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA753151 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2477300 2477300 PRJNA753151_S_NODE_278102_length_168_cov_1.376000_g275812_i0 PRJNA753151 278102 168 1.376 2.31168 Metazoa 33208 Mollusca Mollusca 311 2.11e-80   NTclustered gi|1928112764|gb|MT947788.1| 6523 g275812 i0 100 99.9523809523809 168 0 100 0 1 168 1461 1628 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 16792 311 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
21604019 21604019 PRJNA753151_S_NODE_150997_length_236_cov_3.471503_g148707_i0 PRJNA753151 150997 236 3.471503 8.19274708 Metazoa 33208 Mollusca Mollusca 436 4.999999999999999e-118   NTclustered gi|1928112766|gb|MT947789.1| 6523 g148707 i0 100 99.9364406779661 236 0 100 0 1 236 272 37 Lymnaea stagnalis isolate Lsta_466444 hypothetical protein mRNA, complete cds blastn 23585 436 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
23683839 23683839 PRJNA753151_S_NODE_82359_length_305_cov_1.694656_g80069_i0 PRJNA753151 82359 305 1.694656 5.1687008 Mytilus trossulus 6551 Mollusca Mollusca 52.8 0.028   NTclustered gi|2693897466|ref|XM_063550109.1| 6551 g80069 i0 100 0.0918032786885246 28 0 9 0 214 241 853 826 PREDICTED: Mytilus trossulus E3 ubiquitin-protein ligase TRIM45-like (LOC134690135), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
30505166 30505166 PRJNA753151_S_NODE_4313_length_907_cov_20.524306_g3500_i0 PRJNA753151 4313 907 20.524306 186.15545542 Metazoa 33208 Mollusca Mollusca 82.4 2.74e-14   NR XP_059141807.1 109671 g3500 i0 52.5 1.30650496141125 59 28 19.5 0 89 265 191 249 XP_059141807.1 carboxypeptidase inhibitor SmCI-like [Physella acuta] diamond 1185 82.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;