contig_metadata
19 rows where bioproject = "PRJNA753112" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1201471 | 1201471 | PRJNA753112_P_NODE_14001_length_363_cov_1.789655_g13659_i0 | PRJNA753112 | 14001 | 363 | 1.789655 | 6.49644765 | Streptococcus | 1301 | Bacteria | Bacteria | 604 | 2.1099999999999991e-168 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g13659 | i0 | 96.694 | 332.223140495868 | 363 | 12 | 100 | 0 | 1 | 363 | 951289 | 951651 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 120597 | 604 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 3753359 | 3753359 | PRJNA753112_P_NODE_29343_length_252_cov_0.871508_g29001_i0 | PRJNA753112 | 29343 | 252 | 0.871508 | 2.19620016 | Lactococcus | 1357 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2800799246|gb|CP093959.1| | 1358 | g29001 | i0 | 100 | 99.9960317460317 | 252 | 0 | 100 | 0 | 1 | 252 | 728575 | 728826 | Lactococcus lactis strain FAM 17919 chromosome, complete genome | blastn | 25199 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 6305559 | 6305559 | PRJNA753112_P_NODE_18465_length_316_cov_1.279835_g18123_i0 | PRJNA753112 | 18465 | 316 | 1.279835 | 4.0442786 | Streptococcus | 1301 | Bacteria | Bacteria | 579 | 1.0999999999999999e-160 | NTclustered | gi|2890261556|gb|CP177179.1| | 1304 | g18123 | i0 | 99.684 | 121.927215189873 | 316 | 1 | 100 | 0 | 1 | 316 | 14967 | 15282 | Streptococcus salivarius strain MRD-NRLLH chromosome, complete genome | blastn | 38529 | 584 | 0.991438356164384 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 7579641 | 7579641 | PRJNA753112_P_NODE_32386_length_245_cov_0.906977_g32044_i0 | PRJNA753112 | 32386 | 245 | 0.906977 | 2.22209365 | Geobacillus | 129337 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2529051051|gb|CP128453.1| | 1422 | g32044 | i0 | 100 | 29.9632653061224 | 245 | 0 | 100 | 0 | 1 | 245 | 3339226 | 3338982 | Geobacillus stearothermophilus strain EF60045 chromosome, complete genome | blastn | 7341 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus stearothermophilus | ||
| 8382368 | 8382368 | PRJNA753112_P_NODE_28707_length_253_cov_1.450000_g28365_i0 | PRJNA753112 | 28707 | 253 | 1.45 | 3.6685 | Paenibacillus sp. FSL R5-0912 | 1536771 | Bacteria | Bacteria | 457 | 4.16e-124 | NTclustered | gi|2709743304|gb|CP150226.1| | 1536771 | g28365 | i0 | 99.209 | 1123.56126482213 | 253 | 2 | 100 | 0 | 1 | 253 | 3493357 | 3493105 | Paenibacillus sp. FSL R5-0912 chromosome, complete genome | blastn | 284261 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. FSL R5-0912 | ||
| 15230356 | 15230356 | PRJNA753112_P_NODE_9672_length_436_cov_911.421488_g9330_i0 | PRJNA753112 | 9672 | 436 | 911.421488 | 3973.79768768 | FCB group | 1783270 | Bacteria | Bacteria | 65.8 | 5.41e-6 | NTclustered | gi|2504358668|gb|CP116033.1| | 1517 | g9330 | i0 | 97.368 | 3.78669724770642 | 38 | 1 | 9 | 0 | 12 | 49 | 807200 | 807163 | Thermoanaerobacterium thermosaccharolyticum strain MJ1 chromosome, complete genome | blastn | 1651 | 65.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium thermosaccharolyticum | ||
| 16504558 | 16504558 | PRJNA753112_P_NODE_25593_length_269_cov_4.239796_g25251_i0 | PRJNA753112 | 25593 | 269 | 4.239796 | 11.40505124 | Streptococcus | 1301 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g25251 | i0 | 100 | 336 | 269 | 0 | 100 | 0 | 1 | 269 | 902422 | 902690 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 90384 | 497 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 18580800 | 18580800 | PRJNA753112_P_NODE_24775_length_274_cov_1.184080_g24433_i0 | PRJNA753112 | 24775 | 274 | 1.18408 | 3.2443792 | root | 1 | Root_unresolved | Root_unresolved | 72.8 | 9.77e-13 | NR | BAS27306.1 | 1555112 | g24433 | i0 | 48.3 | 1.88321167883212 | 87 | 43 | 94.2 | 2 | 17 | 274 | 218 | 303 | BAS27306.1 hypothetical protein LIP_1457 [Limnochorda pilosa] | diamond | 516 | 72.8 | 1 | Bacteria | Bacillati | Bacillota | Limnochordia | Limnochordales | Limnochordaceae | Limnochorda | Limnochorda pilosa | ||
| 18580802 | 18580802 | PRJNA753112_P_NODE_24935_length_273_cov_1.170000_g24593_i0 | PRJNA753112 | 24935 | 273 | 1.17 | 3.1941 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 499 | 7.45e-137 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g24593 | i0 | 99.634 | 414.769230769231 | 273 | 1 | 100 | 0 | 1 | 273 | 9541 | 9813 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 113232 | 499 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 19053425 | 19053425 | PRJNA753112_P_NODE_31795_length_246_cov_0.901734_g31453_i0 | PRJNA753112 | 31795 | 246 | 0.901734 | 2.21826564 | Heyndrickxia | 2837504 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2860284610|gb|CP174177.1| | 1398 | g31453 | i0 | 100 | 29 | 246 | 0 | 100 | 0 | 1 | 246 | 1789218 | 1789463 | Heyndrickxia coagulans strain MRD030 chromosome | blastn | 7134 | 455 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Heyndrickxia | Heyndrickxia coagulans | ||
| 20328148 | 20328148 | PRJNA753112_P_NODE_30216_length_249_cov_2.528409_g29874_i0 | PRJNA753112 | 30216 | 249 | 2.528409 | 6.29573841 | Staphylococcus | 1279 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g29874 | i0 | 100 | 475.465863453815 | 249 | 0 | 100 | 0 | 1 | 249 | 762192 | 762440 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 118391 | 460 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 21131333 | 21131333 | PRJNA753112_P_NODE_12317_length_386_cov_1.884984_g11975_i0 | PRJNA753112 | 12317 | 386 | 1.884984 | 7.27603824 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 708 | 0 | NTclustered | gi|1829987927|gb|CP050965.1| | 1379 | g11975 | i0 | 99.741 | 481.652849740933 | 386 | 1 | 100 | 0 | 1 | 386 | 1542013 | 1541628 | Gemella haemolysans strain FDAARGOS_740 chromosome | blastn | 185918 | 708 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 21603607 | 21603607 | PRJNA753112_P_NODE_11977_length_392_cov_3.576803_g11635_i0 | PRJNA753112 | 11977 | 392 | 3.576803 | 14.02106776 | Bacillales | 1385 | Bacteria | Bacteria | 719 | 0 | NTclustered | gi|691218329|gb|CP009046.1| | 1282 | g11635 | i0 | 99.745 | 511.02806122449 | 392 | 1 | 100 | 0 | 1 | 392 | 639858 | 640249 | Staphylococcus epidermidis strain SEI, complete genome | blastn | 200323 | 719 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 24153266 | 24153266 | PRJNA753112_P_NODE_25739_length_269_cov_1.173469_g25397_i0 | PRJNA753112 | 25739 | 269 | 1.173469 | 3.15663161 | Staphylococcus | 1279 | Bacteria | Bacteria | 492 | 1.23e-134 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g25397 | i0 | 99.628 | 100 | 269 | 1 | 100 | 0 | 1 | 269 | 2092594 | 2092862 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 26900 | 492 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 27084552 | 27084552 | PRJNA753112_P_NODE_29302_length_252_cov_0.871508_g28960_i0 | PRJNA753112 | 29302 | 252 | 0.871508 | 2.19620016 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 66.6 | 1.57e-10 | NR | MEG0407679.1 | 1903720 | g28960 | i0 | 53 | 0.785714285714286 | 66 | 30 | 78.6 | 1 | 53 | 250 | 144 | 208 | MEG0407679.1 hypothetical protein [Bacilli bacterium] | diamond | 198 | 66.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 27621707 | 27621707 | PRJNA753112_P_NODE_13724_length_367_cov_1.054422_g13382_i0 | PRJNA753112 | 13724 | 367 | 1.054422 | 3.8697287399999998 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 46.2 | 0.00865 | NR | MBE6951160.1 | 2485925 | g13382 | i0 | 32.9 | 0.596730245231608 | 73 | 48 | 59.7 | 1 | 327 | 109 | 17 | 88 | MBE6951160.1 hypothetical protein [Oscillospiraceae bacterium] | diamond | 219 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 28568711 | 28568711 | PRJNA753112_P_NODE_19207_length_310_cov_1.468354_g18865_i0 | PRJNA753112 | 19207 | 310 | 1.468354 | 4.5518974 | Firmicutes bacterium ADurb.Bin193 | 1852885 | Bacteria | Bacteria | 48.9 | 4.62e-4 | NR | OQB13730.1 | 1852885 | g18865 | i0 | 54.3 | 0.338709677419355 | 35 | 16 | 33.9 | 0 | 7 | 111 | 181 | 215 | OQB13730.1 MAG: KWG Leptospira [Firmicutes bacterium ADurb.Bin193] | diamond | 105 | 48.9 | 1 | Bacteria | Bacillati | Bacillota | Firmicutes bacterium ADurb.Bin193 | ||||||
| 30432441 | 30432441 | PRJNA753112_P_NODE_27313_length_260_cov_1.668449_g26971_i0 | PRJNA753112 | 27313 | 260 | 1.668449 | 4.3379674 | Tissierellales bacterium | 2053631 | Bacteria | Bacteria | 46.2 | 0.00266 | NR | MCT4662835.1 | 2053631 | g26971 | i0 | 42.9 | 0.646153846153846 | 56 | 31 | 64.6 | 1 | 6 | 173 | 64 | 118 | MCT4662835.1 ATPase, T2SS/T4P/T4SS family [Tissierellales bacterium] | diamond | 168 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Tissierellales bacterium | ||||
| 32718003 | 32718003 | PRJNA753112_P_NODE_34560_length_231_cov_2.936709_g34218_i0 | PRJNA753112 | 34560 | 231 | 2.936709 | 6.78379779 | Gudongella | 2692382 | Bacteria | Bacteria | 81.6 | 2.69e-16 | NR | MCR3955806.1 | 2692384 | g34218 | i0 | 52.1 | 2.81818181818182 | 73 | 35 | 94.8 | 0 | 222 | 4 | 192 | 264 | MCR3955806.1 lysophospholipase [Gudongella sp.] | diamond | 651 | 82 | 0.995121951219512 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Tissierellaceae | Gudongella | Gudongella sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;