RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA753112", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA753112 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12208484 12208484 PRJNA753112_P_NODE_26830_length_262_cov_11.174603_g26488_i0 PRJNA753112 26830 262 11.174603 29.27745986 Clytia sp. 3 AFC-2016 1886627 Cnidaria other_Eukaryota 80.5 1.1e-10   NTclustered gi|1069323992|gb|KX665509.1| 1886627 g26488 i0 78.169 17.8206106870229 142 20 51 10 5 138 1597 1735 Clytia sp. 3 AFC-2016 voucher MZUSP:2801 28S ribosomal RNA gene, partial sequence blastn 4669 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia sp. 3 AFC-2016
29746622 29746622 PRJNA753112_P_NODE_27350_length_260_cov_1.475936_g27008_i0 PRJNA753112 27350 260 1.475936 3.8374335999999998 Metazoa 33208 Cnidaria other_Eukaryota 101 1.19e-24   NR XP_057310907.1 13093 g27008 i0 68.8 6.46153846153846 80 23 91.2 2 259 23 89 167 XP_057310907.1 60S ribosomal protein L18-like [Hydractinia symbiolongicarpus] diamond 1680 101 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;