RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA753112", tax_clade = "Opisthokonta" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA753112 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22879137 22879137 PRJNA753112_P_NODE_20838_length_297_cov_3.107143_g20496_i0 PRJNA753112 20838 297 3.107143 9.22821471 Malassezia 55193 Fungi Fungi 547 2.8899999999999992e-151   NTclustered gi|724086716|gb|KM269140.1| 76773 g20496 i0 100 99.1178451178451 296 0 99 0 2 297 1203 908 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 29438 547 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
31285102 31285102 PRJNA753112_P_NODE_8535_length_466_cov_2.592875_g8193_i0 PRJNA753112 8535 466 2.592875 12.0827975 Tulasnella sp. 417 2600225 Fungi Fungi 115 6.7e-30   NR KAG8920536.1 2600225 g8193 i0 49.2 0.836909871244635 130 62 81.1 1 459 82 6 135 KAG8920536.1 ribosomal protein S24A [Tulasnella sp. 417] diamond 390 115 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Tulasnellaceae Tulasnella Tulasnella sp. 417
32370851 32370851 PRJNA753112_P_NODE_33399_length_242_cov_2.035503_g33057_i0 PRJNA753112 33399 242 2.035503 4.92591726 Schizophyllum 5333 Fungi Fungi 79.3 4.68e-15   NR KAL1665935.1 5334 g33057 i0 50 2.91322314049587 80 40 99.2 0 3 242 415 494 KAL1665935.1 hypothetical protein GGF50DRAFT_87702 [Schizophyllum commune] diamond 705 79.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Schizophyllaceae Schizophyllum Schizophyllum commune

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;