RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA753112" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA753112 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27021269 27021269 PRJNA753112_P_NODE_25062_length_272_cov_1.567839_g24720_i0 PRJNA753112 25062 272 1.567839 4.26452208 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 80.5 2.32e-16   NR KAJ3452455.1 1746091 g24720 i0 45.9 8.01838235294118 85 45 93.8 1 263 9 1 84 KAJ3452455.1 40S ribosomal protein S10 [Anaeramoeba flamelloides] diamond 2181 80.5 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30115965 30115965 PRJNA753112_P_NODE_23352_length_282_cov_1.492823_g23010_i0 PRJNA753112 23352 282 1.492823 4.20976086 Streblomastix strix 222440 Preaxostyla other_Eukaryota 111 1.36e-29   NR KAA6379614.1 222440 g23010 i0 58.2 3.74468085106383 91 38 96.8 0 279 7 3 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1056 111 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;