RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA753112" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA753112 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179135 27179135 PRJNA753112_P_NODE_6282_length_545_cov_2.989407_g5943_i0 PRJNA753112 6282 545 2.989407 16.29226815 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 208 2.52e-63   NR MDO8336486.1 2026720 g5943 i0 58.9 0.990825688073395 180 70 98 2 1 534 161 338 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 540 208 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30084340 30084340 PRJNA753112_P_NODE_13372_length_371_cov_1.862416_g13030_i0 PRJNA753112 13372 371 1.862416 6.90956336 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 59.7 1.53e-7   NR MDO8336486.1 2026720 g13030 i0 47.1 0.549865229110512 68 25 50.9 2 190 2 7 68 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 204 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30125710 30125710 PRJNA753112_P_NODE_32772_length_244_cov_0.912281_g32430_i0 PRJNA753112 32772 244 0.912281 2.22596564 Pseudomonadati 3379134 Bacteria Bacteria 62 6.1e-9   NR MDR3548433.1 2053589 g32430 i0 46.8 2.91393442622951 79 39 97.1 2 8 244 102 177 MDR3548433.1 HAD-IC family P-type ATPase [Candidatus Paceibacterota bacterium] diamond 711 62 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32834042 32834042 PRJNA753112_P_NODE_5260_length_596_cov_2.126195_g4921_i0 PRJNA753112 5260 596 2.126195 12.6721222 Candidatus Schekmanbacteria bacterium RBG_16_38_1 2419984 Bacteria Bacteria 319 5.06e-108   NR OGL46129.1 1817879 g4921 i0 74.2 1.99328859060403 198 51 99.7 0 594 1 3 200 OGL46129.1 MAG: hypothetical protein A2W05_09745 [Candidatus Schekmanbacteria bacterium RBG_16_38_10] diamond 1188 319 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium RBG_16_38_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;