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contig_metadata

40 rows where bioproject = "PRJNA752572" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 40 ✖

bioproject 1

  • PRJNA752572 · 40 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2476731 2476731 PRJNA752572_P_NODE_233302_length_173_cov_1.775362_g232795_i0 PRJNA752572 233302 173 1.775362 3.07137626 root 1 Root_unresolved Root_unresolved 315 1.68e-81   NTclustered gi|42557759|emb|AJ627422.1| 29281 g232795 i0 99.422 100.156069364162 173 1 100 0 1 173 40017 39845 Uncultured crenarchaeote genomic fragment 54d9 blastn 17327 315 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
4557067 4557067 PRJNA752572_P_NODE_65444_length_337_cov_1.589404_g64937_i0 PRJNA752572 65444 337 1.589404 5.35629148 archaeon 1906665 Archaea Archaea 122 2.44e-30   NR RYG41393.1 1906665 g64937 i0 74.1 0.72106824925816 81 21 72.1 0 244 2 356 436 RYG41393.1 MAG: hypothetical protein EON68_03130, partial [archaeon] diamond 243 122 1 Archaea               archaeon
9657157 9657157 PRJNA752572_P_NODE_9188_length_844_cov_3.318912_g8868_i0 PRJNA752572 9188 844 3.318912 28.01161728 Methanosarcinales archaeon 2250255 Archaea Archaea 338 9.959999999999999e-112   NR RYE83110.1 2250255 g8868 i0 62 0.945497630331754 266 92 94.5 3 844 47 160 416 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 798 338 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
18580371 18580371 PRJNA752572_P_NODE_17035_length_647_cov_8.978758_g16614_i0 PRJNA752572 17035 647 8.978758 58.09256426 archaeon 1906665 Archaea Archaea 258 4.1e-85   NR MCQ2818557.1 1906665 g16614 i0 79.7 4.79443585780526 148 30 68.6 0 497 54 1 148 MCQ2818557.1 ubiquitin-conjugating enzyme E2 [archaeon] diamond 3102 258 1 Archaea               archaeon
20327820 20327820 PRJNA752572_P_NODE_179116_length_199_cov_2.219512_g178609_i0 PRJNA752572 179116 199 2.219512 4.41682888 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 105 1.68e-24   NR MBU1681720.1 2250274 g178609 i0 82.8 0.874371859296482 58 8 85.9 2 28 198 247 303 MBU1681720.1 methionine--tRNA ligase [Candidatus Micrarchaeota archaeon] diamond 174 105 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
24955191 24955191 PRJNA752572_P_NODE_53920_length_372_cov_3.409496_g53413_i0 PRJNA752572 53920 372 3.409496 12.68332512 root 1 Root_unresolved Root_unresolved 173 1.4699999999999996e-52   NR WP_048057560.1 41980 g53413 i0 63.6 14.1209677419355 121 44 97.6 0 364 2 6 126 WP_048057560.1 MULTISPECIES: peptide-methionine (S)-S-oxide reductase MsrA [Metallosphaera] diamond 5253 173 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera  
26989336 26989336 PRJNA752572_P_NODE_229562_length_174_cov_7.330935_g229055_i0 PRJNA752572 229562 174 7.330935 12.7558269 archaeon 1906665 Archaea Archaea 39.3 0.0351   NR MCP8304388.1 1906665 g229055 i0 56.1 0.706896551724138 41 15 70.7 1 17 139 4 41 MCP8304388.1 30S ribosomal protein S30e [archaeon] diamond 123 39.3 1 Archaea               archaeon
27115846 27115846 PRJNA752572_P_NODE_173022_length_203_cov_1.488095_g172515_i0 PRJNA752572 173022 203 1.488095 3.02083285 archaeon 1906665 Archaea Archaea 44.7 0.00448   NR MCQ2821662.1 1906665 g172515 i0 40 1.74384236453202 60 35 87.2 1 22 198 241 300 MCQ2821662.1 TLD domain-containing protein [archaeon] diamond 354 44.7 1 Archaea               archaeon
27590155 27590155 PRJNA752572_P_NODE_208084_length_184_cov_1.845638_g207577_i0 PRJNA752572 208084 184 1.845638 3.39597392 Candidatus Norongarragalinales archaeon 2886393 Archaea Archaea 96.3 1.89e-21   NR HLC48531.1 2886393 g207577 i0 73.2 2.64130434782609 56 15 91.3 0 170 3 418 473 HLC48531.1 lysine--tRNA ligase [Candidatus Norongarragalinales archaeon] diamond 486 96.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Norongarragalinales     Candidatus Norongarragalinales archaeon
27663159 27663159 PRJNA752572_P_NODE_283044_length_155_cov_4.058333_g282537_i0 PRJNA752572 283044 155 4.058333 6.29041615 root 1 Root_unresolved Root_unresolved 62.4 1.29e-9   NR WP_013194585.1 2322 g282537 i0 63.6 4.12258064516129 44 16 85.2 0 132 1 2 45 WP_013194585.1 cryptochrome/photolyase family protein [Methanohalobium evestigatum] diamond 639 62.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanohalobium Methanohalobium evestigatum
27842384 27842384 PRJNA752572_P_NODE_234004_length_173_cov_1.427536_g233497_i0 PRJNA752572 234004 173 1.427536 2.46963728 archaeon 1906665 Archaea Archaea 46.6 6.31e-4   NR MCQ2816816.1 1906665 g233497 i0 39.2 1.73410404624277 51 31 88.4 0 160 8 129 179 MCQ2816816.1 hypothetical protein [archaeon] diamond 300 46.6 1 Archaea               archaeon
27842389 27842389 PRJNA752572_P_NODE_266904_length_164_cov_1.697674_g266397_i0 PRJNA752572 266904 164 1.697674 2.78418536 archaeon 1906665 Archaea Archaea 41.2 0.0456   NR MCQ2820475.1 1906665 g266397 i0 32.7 1.00609756097561 55 34 97 2 5 163 455 508 MCQ2820475.1 hypothetical protein [archaeon] diamond 165 41.2 1 Archaea               archaeon
28252958 28252958 PRJNA752572_P_NODE_236106_length_172_cov_2.956204_g235599_i0 PRJNA752572 236106 172 2.956204 5.08467088 archaeon 1906665 Archaea Archaea 43.1 0.00346   NR MCQ2818570.1 1906665 g235599 i0 40 0.784883720930233 45 27 78.5 0 31 165 13 57 MCQ2818570.1 hypothetical protein [archaeon] diamond 135 43.1 1 Archaea               archaeon
28325903 28325903 PRJNA752572_P_NODE_240106_length_171_cov_1.992647_g239599_i0 PRJNA752572 240106 171 1.992647 3.40742637 Pyrobaculum 2276 Archaea Archaea 50.4 8.92e-6   NR WP_011901773.1 2276 g239599 i0 73.1 2.78947368421053 26 7 45.6 0 1 78 120 145 WP_011901773.1 MULTISPECIES: 30S ribosomal protein S12 [Pyrobaculum] diamond 477 50.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum  
28411009 28411009 PRJNA752572_P_NODE_23846_length_556_cov_2.368522_g23388_i0 PRJNA752572 23846 556 2.368522 13.16898232 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 171 7.12e-50   NR HLC74877.1 2910166 g23388 i0 49.7 1.91007194244604 173 84 92.8 3 555 40 65 235 HLC74877.1 fatty acid desaturase family protein [Candidatus Nanoarchaeia archaeon] diamond 1062 171 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28789625 28789625 PRJNA752572_P_NODE_212187_length_182_cov_1.959184_g211680_i0 PRJNA752572 212187 182 1.959184 3.56571488 Methanoregulaceae archaeon 2485498 Archaea Archaea 47.4 3.85e-4   NR HNJ81026.1 2485498 g211680 i0 41.5 0.873626373626374 53 29 87.4 1 159 1 603 653 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 159 47.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
28915807 28915807 PRJNA752572_P_NODE_199468_length_188_cov_2.640523_g198961_i0 PRJNA752572 199468 188 2.640523 4.96418324 archaeon 1906665 Archaea Archaea 77.4 4.85e-16   NR RYG44178.1 1906665 g198961 i0 54.8 1.8031914893617 62 28 98.9 0 2 187 11 72 RYG44178.1 MAG: hypothetical protein EON67_12060, partial [archaeon] diamond 339 77.4 1 Archaea               archaeon
29074141 29074141 PRJNA752572_P_NODE_207988_length_184_cov_1.973154_g207481_i0 PRJNA752572 207988 184 1.973154 3.63060336 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 55.1 6.94e-7   NR HEY9245765.1 2032688 g207481 i0 76.5 2.23369565217391 34 8 55.4 0 105 4 2 35 HEY9245765.1 serine hydroxymethyltransferase [Candidatus Methanoperedens sp.] diamond 411 55.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29263189 29263189 PRJNA752572_P_NODE_194109_length_191_cov_1.692308_g193602_i0 PRJNA752572 194109 191 1.692308 3.23230828 archaeon 1906665 Archaea Archaea 93.2 6.75e-22   NR RYY31439.1 1906665 g193602 i0 72.1 0.958115183246073 61 17 95.8 0 5 187 98 158 RYY31439.1 MAG: hypothetical protein EON62_06400, partial [archaeon] diamond 183 93.2 1 Archaea               archaeon
29800039 29800039 PRJNA752572_P_NODE_130391_length_235_cov_1.400000_g129884_i0 PRJNA752572 130391 235 1.4 3.29 Methanobacteriota archaeon 2026739 Archaea Archaea 70.5 1.49e-12   NR RMG30150.1 2026739 g129884 i0 47.8 0.85531914893617 67 32 85.5 1 231 31 160 223 RMG30150.1 MAG: aquaporin [Methanobacteriota archaeon] diamond 201 70.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29800050 29800050 PRJNA752572_P_NODE_243151_length_170_cov_3.125926_g242644_i0 PRJNA752572 243151 170 3.125926 5.3140742 Thermoplasmatales archaeon B_DKE 1961136 Archaea Archaea 65.5 1.3099999999999999e-10   NR OWP57015.1 1961136 g242644 i0 48.2 0.988235294117647 56 29 98.8 0 3 170 343 398 OWP57015.1 MAG: hypothetical protein B2I17_02260 [Thermoplasmatales archaeon B_DKE] diamond 168 65.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon B_DKE
30052724 30052724 PRJNA752572_P_NODE_194451_length_191_cov_1.467949_g193944_i0 PRJNA752572 194451 191 1.467949 2.80378259 Thermoplasmatales archaeon 2268204 Archaea Archaea 43.1 0.0126   NR HEC76766.1 2268204 g193944 i0 48.1 0.848167539267016 27 14 42.4 0 144 64 35 61 HEC76766.1 alanyl-tRNA editing protein [Thermoplasmatales archaeon] diamond 162 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
30062602 30062602 PRJNA752572_P_NODE_276071_length_162_cov_1.259843_g275564_i0 PRJNA752572 276071 162 1.259843 2.04094566 root 1 Root_unresolved Root_unresolved 48.9 2.74e-5   NR MCK5605676.1 2026773 g275564 i0 70.4 2.90740740740741 27 8 50 0 94 14 115 141 MCK5605676.1 NADAR family protein [Candidatus Pacearchaeota archaeon] diamond 471 48.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30115947 30115947 PRJNA752572_P_NODE_262192_length_165_cov_2.569231_g261685_i0 PRJNA752572 262192 165 2.569231 4.23923115 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 59.7 8.93e-9   NR MCG7843943.1 1906667 g261685 i0 44.4 1.96363636363636 54 29 98.2 1 163 2 191 243 MCG7843943.1 hypothetical protein [Methanomassiliicoccales archaeon] diamond 324 59.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
30337688 30337688 PRJNA752572_P_NODE_238172_length_172_cov_1.160584_g237665_i0 PRJNA752572 238172 172 1.160584 1.99620448 archaeon 1906665 Archaea Archaea 48.5 1.33e-4   NR MCQ2820035.1 1906665 g237665 i0 42.1 0.994186046511628 57 33 99.4 0 171 1 4 60 MCQ2820035.1 protein kinase [archaeon] diamond 171 48.5 1 Archaea               archaeon
30589915 30589915 PRJNA752572_P_NODE_95213_length_277_cov_2.264463_g94706_i0 PRJNA752572 95213 277 2.264463 6.27256251 archaeon 1906665 Archaea Archaea 80.9 3.48e-16   NR MCQ2816809.1 1906665 g94706 i0 39.8 5.03610108303249 123 41 97.5 3 2 271 19 141 MCQ2816809.1 DnaJ domain-containing protein [archaeon] diamond 1395 80.9 1 Archaea               archaeon
30811149 30811149 PRJNA752572_P_NODE_176514_length_201_cov_1.271084_g176007_i0 PRJNA752572 176514 201 1.271084 2.55487884 archaeon 1906665 Archaea Archaea 42.7 0.0214   NR MCQ2820519.1 1906665 g176007 i0 33.9 0.925373134328358 62 40 92.5 1 188 3 68 128 MCQ2820519.1 carbonic anhydrase family protein [archaeon] diamond 186 42.7 1 Archaea               archaeon
31095431 31095431 PRJNA752572_P_NODE_142495_length_224_cov_2.349206_g141988_i0 PRJNA752572 142495 224 2.349206 5.26222144 Desulfurococcaceae archaeon 2184738 Archaea Archaea 59.7 2.08e-8   NR PWV37465.1 2184738 g141988 i0 40.5 3.96428571428571 74 44 99.1 0 222 1 74 147 PWV37465.1 MAG: membrane protease subunit, stomatin/prohibitin-like protein [Desulfurococcaceae archaeon] diamond 888 59.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
31601637 31601637 PRJNA752572_P_NODE_228276_length_175_cov_1.714286_g227769_i0 PRJNA752572 228276 175 1.714286 3.0000005 archaeon 1906665 Archaea Archaea 49.3 7.34e-5   NR MCQ2818531.1 1906665 g227769 i0 37.5 0.822857142857143 48 30 82.3 0 145 2 7 54 MCQ2818531.1 hypothetical protein [archaeon] diamond 144 49.3 1 Archaea               archaeon
31737724 31737724 PRJNA752572_P_NODE_224297_length_177_cov_1.373239_g223790_i0 PRJNA752572 224297 177 1.373239 2.43063303 Methanomethylophilus 1291539 Archaea Archaea 62.8 2.24e-11   NR MCK5291341.1 1906666 g223790 i0 62.5 8.30508474576271 40 15 67.8 0 177 58 21 60 MCK5291341.1 30S ribosomal protein S27ae [Thermoplasmata archaeon] diamond 1470 63.2 0.993670886075949 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31886083 31886083 PRJNA752572_P_NODE_19037_length_617_cov_2.848797_g18601_i0 PRJNA752572 19037 617 2.848797 17.57707749 Nanobdellota archaeon 2026764 Archaea Archaea 46.6 0.0439   NR MDP3991967.1 2026764 g18601 i0 27.2 0.894651539708266 184 117 84.6 7 548 27 69 245 MDP3991967.1 PKD domain-containing protein [Nanoarchaeota archaeon] diamond 552 46.6 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31949287 31949287 PRJNA752572_P_NODE_282577_length_156_cov_2.429752_g282070_i0 PRJNA752572 282577 156 2.429752 3.79041312 Nanobdellota archaeon 2026764 Archaea Archaea 48.1 1.4e-4   NR MFC1685448.1 2026764 g282070 i0 47.9 0.923076923076923 48 19 92.3 2 155 12 186 227 MFC1685448.1 aminopeptidase N [Nanoarchaeota archaeon] diamond 144 48.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32044356 32044356 PRJNA752572_P_NODE_15398_length_676_cov_4.826833_g14993_i0 PRJNA752572 15398 676 4.826833 32.62939108 archaeon 1906665 Archaea Archaea 187 4.199999999999999e-56   NR RYY33328.1 1906665 g14993 i0 45.1 0.865384615384615 195 97 83 5 627 67 4 196 RYY33328.1 MAG: hypothetical protein EON62_04335 [archaeon] diamond 585 187 1 Archaea               archaeon
32107605 32107605 PRJNA752572_P_NODE_270738_length_163_cov_1.875000_g270231_i0 PRJNA752572 270738 163 1.875 3.05625 archaeon 1906665 Archaea Archaea 50.4 2.42e-5   NR MCQ2821066.1 1906665 g270231 i0 47.1 0.938650306748466 51 25 93.9 1 162 10 73 121 MCQ2821066.1 bifunctional metallophosphatase/5'-nucleotidase [archaeon] diamond 153 50.4 1 Archaea               archaeon
32202599 32202599 PRJNA752572_P_NODE_24658_length_548_cov_1.914230_g24192_i0 PRJNA752572 24658 548 1.91423 10.4899804 Vulcanisaeta sp. 2020871 Archaea Archaea 139 1.41e-35   NR MFP3236626.1 2020871 g24192 i0 43.4 0.996350364963504 182 99 99.1 3 543 1 92 270 MFP3236626.1 aspartate aminotransferase family protein [Vulcanisaeta sp.] diamond 546 139 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta sp.
32455902 32455902 PRJNA752572_P_NODE_200059_length_188_cov_1.725490_g199552_i0 PRJNA752572 200059 188 1.72549 3.2439212 archaeon 1906665 Archaea Archaea 49.7 3.37e-5   NR MCQ2820115.1 1906665 g199552 i0 40.8 0.781914893617021 49 26 73.4 1 152 15 123 171 MCQ2820115.1 hypothetical protein [archaeon] diamond 147 49.7 1 Archaea               archaeon
32613631 32613631 PRJNA752572_P_NODE_118540_length_247_cov_1.698113_g118033_i0 PRJNA752572 118540 247 1.698113 4.19433911 archaeon 1906665 Archaea Archaea 44.7 0.00815   NR MCQ2817704.1 1906665 g118033 i0 43.9 0.497975708502024 41 23 49.8 0 162 40 39 79 MCQ2817704.1 hypothetical protein [archaeon] diamond 123 44.7 1 Archaea               archaeon
32739734 32739734 PRJNA752572_P_NODE_233280_length_173_cov_1.789855_g232773_i0 PRJNA752572 233280 173 1.789855 3.09644915 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 42.4 0.0202   NR MBL7206387.1 3121606 g232773 i0 29.8 0.988439306358382 57 40 98.8 0 172 2 594 650 MBL7206387.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 171 42.4 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
32875356 32875356 PRJNA752572_P_NODE_129240_length_236_cov_1.462687_g128733_i0 PRJNA752572 129240 236 1.462687 3.45194132 root 1 Root_unresolved Root_unresolved 52.8 1.02e-5   NR MCQ2815850.1 1906665 g128733 i0 41.8 9.54661016949153 55 32 69.9 0 211 47 2074 2128 MCQ2815850.1 hypothetical protein [archaeon] diamond 2253 52.8 1 Archaea               archaeon
32896867 32896867 PRJNA752572_P_NODE_53280_length_374_cov_3.690265_g52774_i0 PRJNA752572 53280 374 3.690265 13.8015911 archaeon 1906665 Archaea Archaea 124 2.71e-30   NR MCQ2816174.1 1906665 g52774 i0 46.3 1.73262032085562 108 58 86.6 0 1 324 426 533 MCQ2816174.1 hypothetical protein [archaeon] diamond 648 124 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;