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contig_metadata

23 rows where bioproject = "PRJNA752572", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Myxococcota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA752572 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2476734 2476734 PRJNA752572_P_NODE_25102_length_543_cov_6.982283_g24635_i0 PRJNA752572 25102 543 6.982283 37.91379669 Myxococcales bacterium 2026763 Bacteria Bacteria 161 1.3699999999999998e-47   NR MCA9640750.1 2026763 g24635 i0 70.5 0.729281767955801 132 36 71.3 2 511 125 1 132 MCA9640750.1 hypothetical protein [Myxococcales bacterium] diamond 396 161 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
3279939 3279939 PRJNA752572_P_NODE_242843_length_171_cov_0.970588_g242336_i0 PRJNA752572 242843 171 0.970588 1.65970548 Myxococcales bacterium 2026763 Bacteria Bacteria 54.3 1.14e-6   NR MEI7891515.1 2026763 g242336 i0 75.8 2.87719298245614 33 8 57.9 0 170 72 368 400 MEI7891515.1 VWA domain-containing protein [Myxococcales bacterium] diamond 492 54.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
5832229 5832229 PRJNA752572_P_NODE_55085_length_368_cov_4.078078_g54578_i0 PRJNA752572 55085 368 4.078078 15.00732704 Labilithrix luteola 1391654 Bacteria Bacteria 54.7 0.01   NTclustered gi|913610804|gb|CP012333.1| 1391654 g54578 i0 100 0.078804347826087 29 0 8 0 133 161 9099141 9099169 Labilithrix luteola strain DSM 27648, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
7579323 7579323 PRJNA752572_P_NODE_74086_length_316_cov_2.416370_g73579_i0 PRJNA752572 74086 316 2.41637 7.6357292 Nannocystis 53 Bacteria Bacteria 398 3.3e-106   NTclustered gi|2244669|emb|X87286.1| 54 g73579 i0 90 192.879746835443 310 27 97 3 6 313 1045 738 N.exedens 23S rRNA gene blastn 60950 398 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis exedens
12681007 12681007 PRJNA752572_P_NODE_261310_length_166_cov_1.007634_g260803_i0 PRJNA752572 261310 166 1.007634 1.67267244 Myxococcus 32 Bacteria Bacteria 99 1.76e-16   NTclustered gi|2318731907|gb|CP104804.1| 34 g260803 i0 81.102 24.6686746987952 127 20 75 4 3 127 3077016 3077140 Myxococcus xanthus strain DK1050 chromosome blastn 4095 99 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus
17306681 17306681 PRJNA752572_P_NODE_168894_length_205_cov_3.864706_g168387_i0 PRJNA752572 168894 205 3.864706 7.9226473 Nannocystis punicea 2995304 Bacteria Bacteria 187 4.6999999999999985e-43   NTclustered gi|2415023655|gb|CP114040.1| 2995304 g168387 i0 89.333 259.4 150 14 73 2 1 149 7594122 7593974 Nannocystis poenicansa strain FL3 chromosome, complete genome blastn 53177 187 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis punicea
19855716 19855716 PRJNA752572_P_NODE_36376_length_453_cov_4.184211_g35878_i0 PRJNA752572 36376 453 4.184211 18.95447583 Anaeromyxobacter sp. K 447217 Bacteria Bacteria 302 3.95e-77   NTclustered gi|470483543|ref|NR_076598.1| 447217 g35878 i0 84.762 102.894039735099 315 32 68 16 1 307 3 309 Anaeromyxobacter sp. K strain K 23S ribosomal RNA, complete sequence blastn 46611 302 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter sp. K
26672680 26672680 PRJNA752572_P_NODE_68501_length_329_cov_1.795918_g67994_i0 PRJNA752572 68501 329 1.795918 5.90857022 Myxococcota bacterium 2818507 Bacteria Bacteria 57.4 6.79e-7   NR MCS6798186.1 2818507 g67994 i0 39.3 0.765957446808511 84 46 75.7 2 25 273 141 220 MCS6798186.1 hypothetical protein [Myxococcota bacterium] diamond 252 57.4 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
26863364 26863364 PRJNA752572_P_NODE_212861_length_182_cov_1.380952_g212354_i0 PRJNA752572 212861 182 1.380952 2.51333264 Myxococcota bacterium 2818507 Bacteria Bacteria 69.3 6.9e-12   NR MEO1335548.1 2818507 g212354 i0 54.2 1.94505494505495 59 27 97.3 0 1 177 41 99 MEO1335548.1 acyl-CoA dehydrogenase [Myxococcota bacterium] diamond 354 69.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
26863370 26863370 PRJNA752572_P_NODE_24661_length_548_cov_1.619883_g24195_i0 PRJNA752572 24661 548 1.619883 8.87695884 Myxococcales bacterium 2026763 Bacteria Bacteria 119 4.49e-30   NR NNL64796.1 2026763 g24195 i0 45.7 1.52189781021898 140 71 73.9 3 464 60 40 179 NNL64796.1 lipocalin family protein [Myxococcales bacterium] diamond 834 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27210708 27210708 PRJNA752572_P_NODE_253262_length_168_cov_0.992481_g252755_i0 PRJNA752572 253262 168 0.992481 1.66736808 Polyangia bacterium 3058050 Bacteria Bacteria 42 0.025   NR HXU83451.1 3058050 g252755 i0 45.5 0.785714285714286 44 22 78.6 1 33 164 38 79 HXU83451.1 metallophosphoesterase [Polyangia bacterium] diamond 132 42 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
27558202 27558202 PRJNA752572_P_NODE_97004_length_274_cov_3.640167_g96497_i0 PRJNA752572 97004 274 3.640167 9.97405758 Myxococcota bacterium 2818507 Bacteria Bacteria 58.2 1.51e-7   NR MEM7136210.1 2818507 g96497 i0 53.1 1.07299270072993 49 23 53.6 0 53 199 5 53 MEM7136210.1 DUF1295 domain-containing protein [Myxococcota bacterium] diamond 294 58.2 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27748039 27748039 PRJNA752572_P_NODE_11724_length_761_cov_1.768595_g11360_i0 PRJNA752572 11724 761 1.768595 13.45900795 Byssovorax sp. 2927945 Bacteria Bacteria 53.9 3.58e-4   NR MFO0756798.1 2927945 g11360 i0 37.8 0.59526938239159 82 48 31.1 1 46 282 1274 1355 MFO0756798.1 DNRLRE domain-containing protein [Byssovorax sp.] diamond 453 53.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Byssovorax Byssovorax sp.
28505615 28505615 PRJNA752572_P_NODE_49667_length_388_cov_2.005666_g49162_i0 PRJNA752572 49667 388 2.005666 7.78198408 Anaeromyxobacter terrae 2925406 Bacteria Bacteria 111 7.190000000000001e-27   NR WP_279426582.1 2925406 g49162 i0 57.4 0.72680412371134 94 40 72.7 0 283 2 22 115 WP_279426582.1 glycosyltransferase family 2 protein [Anaeromyxobacter terrae] diamond 282 111 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter terrae
28632132 28632132 PRJNA752572_P_NODE_273187_length_163_cov_1.031250_g272680_i0 PRJNA752572 273187 163 1.03125 1.6809375 Polyangiaceae bacterium 2268199 Bacteria Bacteria 55.5 4.06e-7   NR HEY3821838.1 2268199 g272680 i0 51 0.901840490797546 49 24 90.2 0 5 151 153 201 HEY3821838.1 hypothetical protein [Polyangiaceae bacterium] diamond 147 55.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29968001 29968001 PRJNA752572_P_NODE_16971_length_649_cov_2.986971_g16550_i0 PRJNA752572 16971 649 2.986971 19.38544179 Pseudomonadati 3379134 Bacteria Bacteria 208 1.5e-64   NR MDO8426395.1 2026735 g16550 i0 53.3 8.28351309707242 197 91 90.6 1 647 60 1 197 MDO8426395.1 NAD(P)H:quinone oxidoreductase [Deltaproteobacteria bacterium] diamond 5376 209 0.995215311004785 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30115934 30115934 PRJNA752572_P_NODE_116892_length_249_cov_1.308411_g116385_i0 PRJNA752572 116892 249 1.308411 3.25794339 Melittangium boletus 83453 Bacteria Bacteria 90.9 3.76e-19   NR WP_095977847.1 83453 g116385 i0 59.8 2.98795180722892 82 25 98.8 3 3 248 378 451 WP_095977847.1 glycoside hydrolase family 43 protein [Melittangium boletus] diamond 744 90.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Melittangium Melittangium boletus
30147394 30147394 PRJNA752572_P_NODE_269272_length_164_cov_1.023256_g268765_i0 PRJNA752572 269272 164 1.023256 1.67813984 Polyangiales bacterium 3034171 Bacteria Bacteria 62.8 1.08e-9   NR MFI5300297.1 3034171 g268765 i0 63.5 2.79878048780488 52 19 95.1 0 5 160 421 472 MFI5300297.1 ABC transporter substrate-binding protein [Polyangiales bacterium] diamond 459 62.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31895989 31895989 PRJNA752572_P_NODE_199057_length_189_cov_1.038961_g198550_i0 PRJNA752572 199057 189 1.038961 1.96363629 Pseudomonadati 3379134 Bacteria Bacteria 83.2 1e-16   NR TDJ08845.1 2026735 g198550 i0 64.3 2.66666666666667 56 20 88.9 0 2 169 358 413 TDJ08845.1 MAG: 2-oxoglutarate dehydrogenase E1 component [Deltaproteobacteria bacterium] diamond 504 83.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32266106 32266106 PRJNA752572_P_NODE_238158_length_172_cov_1.167883_g237651_i0 PRJNA752572 238158 172 1.167883 2.00875876 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.00403   NR MBM4358241.1 2026735 g237651 i0 44.2 0.75 43 21 75 1 170 42 108 147 MBM4358241.1 FHA domain-containing protein [Deltaproteobacteria bacterium] diamond 129 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32623399 32623399 PRJNA752572_P_NODE_187940_length_194_cov_2.792453_g187433_i0 PRJNA752572 187940 194 2.792453 5.41735882 Bacteria 2 Bacteria Bacteria 59.7 1.64e-8   NR NUO47422.1 2268199 g187433 i0 65.9 2.5979381443299 44 14 66.5 1 193 65 252 295 NUO47422.1 MBL fold metallo-hydrolase [Polyangiaceae bacterium] diamond 504 59.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32686316 32686316 PRJNA752572_P_NODE_258540_length_166_cov_2.038168_g258033_i0 PRJNA752572 258540 166 2.038168 3.38335888 root 1 Root_unresolved Root_unresolved 43.5 0.00709   NR MBW2328797.1 2026735 g258033 i0 56.3 6.21686746987952 48 16 86.7 3 23 166 30 72 MBW2328797.1 2-isopropylmalate synthase [Deltaproteobacteria bacterium] diamond 1032 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32770994 32770994 PRJNA752572_P_NODE_75640_length_313_cov_1.280576_g75133_i0 PRJNA752572 75640 313 1.280576 4.00820288 Myxococcales bacterium 2026763 Bacteria Bacteria 150 8.53e-40   NR MBK6460669.1 2026763 g75133 i0 68 6.91054313099042 103 33 98.7 0 3 311 417 519 MBK6460669.1 endopeptidase La [Myxococcales bacterium] diamond 2163 150 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;