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contig_metadata

25 rows where bioproject = "PRJNA752572", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 25 ✖

tax_kingdom 1

  • Pseudomonadati · 25 ✖

bioproject 1

  • PRJNA752572 · 25 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24153059 24153059 PRJNA752572_P_NODE_86299_length_292_cov_1.548638_g85792_i0 PRJNA752572 86299 292 1.548638 4.52202296 Blastocatellia bacterium 2052146 Bacteria Bacteria 118 1.2499999999999998e-29   NR HCA56964.1 2052146 g85792 i0 65.6 3.82191780821918 90 31 92.5 0 288 19 126 215 HCA56964.1 alkene reductase [Blastocatellia bacterium] diamond 1116 118 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27084535 27084535 PRJNA752572_P_NODE_262482_length_165_cov_2.130769_g261975_i0 PRJNA752572 262482 165 2.130769 3.51576885 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 42.7 0.0134   NR MBV8831339.1 2052142 g261975 i0 38.5 0.709090909090909 39 24 70.9 0 162 46 387 425 MBV8831339.1 RICIN domain-containing protein [Acidobacteriaceae bacterium] diamond 117 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
27115847 27115847 PRJNA752572_P_NODE_179542_length_199_cov_1.628049_g179035_i0 PRJNA752572 179542 199 1.628049 3.23981751 Blastocatellia bacterium 2052146 Bacteria Bacteria 86.7 4.45e-19   NR MBX7219371.1 2052146 g179035 i0 56.1 1.73366834170854 57 25 85.9 0 197 27 10 66 MBX7219371.1 metallophosphatase domain-containing protein [Blastocatellia bacterium] diamond 345 86.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27748041 27748041 PRJNA752572_P_NODE_123384_length_242_cov_1.294686_g122877_i0 PRJNA752572 123384 242 1.294686 3.13314012 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0199   NR HJO04534.1 1978231 g122877 i0 33.3 0.669421487603306 54 36 66.9 0 14 175 52 105 HJO04534.1 GNAT family N-acetyltransferase [Acidobacteriota bacterium] diamond 162 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27915462 27915462 PRJNA752572_P_NODE_63365_length_342_cov_5.957655_g62858_i0 PRJNA752572 63365 342 5.957655 20.3751801 Terriglobia 204432 Bacteria Bacteria 139 4.23e-40   NR HXP22666.1 2771375 g62858 i0 58.4 6.90350877192982 113 47 99.1 0 339 1 10 122 HXP22666.1 RidA family protein [Candidatus Sulfotelmatobacter sp.] diamond 2361 140 0.992857142857143 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
27968834 27968834 PRJNA752572_P_NODE_215665_length_181_cov_1.089041_g215158_i0 PRJNA752572 215665 181 1.089041 1.97116421 Acidobacteriota bacterium 1978231 Bacteria Bacteria 41.6 0.0406   NR MEM7482109.1 1978231 g215158 i0 50 0.56353591160221 34 17 56.4 0 116 15 8 41 MEM7482109.1 hypothetical protein [Acidobacteriota bacterium] diamond 102 41.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28000662 28000662 PRJNA752572_P_NODE_257065_length_167_cov_1.000000_g256558_i0 PRJNA752572 257065 167 1 1.67 Candidatus Sulfomarinibacteraceae bacterium 3069604 Bacteria Bacteria 41.6 0.0339   NR HSO30628.1 3069604 g256558 i0 41.1 1.0059880239521 56 21 79 2 165 34 210 265 HSO30628.1 methyltransferase [Candidatus Sulfomarinibacteraceae bacterium] diamond 168 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Candidatus Sulfomarinibacteraceae   Candidatus Sulfomarinibacteraceae bacterium
28063503 28063503 PRJNA752572_P_NODE_250245_length_169_cov_0.873134_g249738_i0 PRJNA752572 250245 169 0.873134 1.47559646 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 54.7 8.48e-7   NR HEV8435222.1 2651171 g249738 i0 51.9 1.89940828402367 52 24 90.5 1 1 153 231 282 HEV8435222.1 Ig-like domain-containing protein [Thermoanaerobaculia bacterium] diamond 321 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28189634 28189634 PRJNA752572_P_NODE_183306_length_197_cov_1.481481_g182799_i0 PRJNA752572 183306 197 1.481481 2.91851757 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 75.5 5.78e-14   NR HEX8880156.1 3069120 g182799 i0 58.5 9.89847715736041 65 26 99 1 2 196 487 550 HEX8880156.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Candidatus Acidiferrum sp.] diamond 1950 75.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
28411004 28411004 PRJNA752572_P_NODE_160706_length_211_cov_1.363636_g160199_i0 PRJNA752572 160706 211 1.363636 2.87727196 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 57 2.19e-7   NR HEX9161812.1 2651171 g160199 i0 55.6 2.34597156398104 45 20 64 0 167 33 147 191 HEX9161812.1 M20 family metallopeptidase [Thermoanaerobaculia bacterium] diamond 495 57 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28821065 28821065 PRJNA752572_P_NODE_276868_length_162_cov_1.039370_g276361_i0 PRJNA752572 276868 162 1.03937 1.6837794 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.7 0.00257   NR MCL5745481.1 1978231 g276361 i0 45.2 0.777777777777778 42 23 77.8 0 2 127 1 42 MCL5745481.1 Ig domain-containing protein [Acidobacteriota bacterium] diamond 126 44.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29074152 29074152 PRJNA752572_P_NODE_276548_length_162_cov_1.039370_g276041_i0 PRJNA752572 276548 162 1.03937 1.6837794 Terriglobales bacterium 2282142 Bacteria Bacteria 84 2.35e-17   NR HXY03817.1 2282142 g276041 i0 77.6 0.907407407407407 49 11 90.7 0 1 147 265 313 HXY03817.1 Fic family protein [Terriglobales bacterium] diamond 147 84 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
29358195 29358195 PRJNA752572_P_NODE_17669_length_638_cov_1.845771_g17241_i0 PRJNA752572 17669 638 1.845771 11.77601898 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 94 3.17e-19   NR HYW72085.1 2283092 g17241 i0 30.9 1.78683385579937 175 108 80.4 2 84 596 63 228 HYW72085.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 1140 94 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29358201 29358201 PRJNA752572_P_NODE_227009_length_176_cov_1.127660_g226502_i0 PRJNA752572 227009 176 1.12766 1.9846816 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 87.4 2.72e-18   NR HEX2311459.1 2910147 g226502 i0 72.4 5.93181818181818 58 16 98.9 0 1 174 317 374 HEX2311459.1 hypothetical protein [Vicinamibacterales bacterium] diamond 1044 87.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29389825 29389825 PRJNA752572_P_NODE_210769_length_183_cov_1.337838_g210262_i0 PRJNA752572 210769 183 1.337838 2.44824354 Geothrix rubra 2927977 Bacteria Bacteria 48.9 7.85e-5   NR WP_285722077.1 2927977 g210262 i0 45.6 3.60655737704918 57 31 93.4 0 4 174 79 135 WP_285722077.1 CAP domain-containing protein [Geothrix rubra] diamond 660 48.9 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix rubra
30115944 30115944 PRJNA752572_P_NODE_236592_length_172_cov_2.043796_g236085_i0 PRJNA752572 236592 172 2.043796 3.51532912 Blastocatellia bacterium 2052146 Bacteria Bacteria 58.9 2.8e-8   NR HEY7913107.1 2052146 g236085 i0 50 0.906976744186046 52 26 90.7 0 172 17 573 624 HEY7913107.1 transketolase [Blastocatellia bacterium] diamond 156 58.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30536682 30536682 PRJNA752572_P_NODE_239013_length_172_cov_0.963504_g238506_i0 PRJNA752572 239013 172 0.963504 1.65722688 Pseudomonadati 3379134 Bacteria Bacteria 49.7 4.89e-5   NR MDJ0841676.1 1978231 g238506 i0 41.1 1.95348837209302 56 33 97.7 0 172 5 200 255 MDJ0841676.1 DUF350 domain-containing protein [Acidobacteriota bacterium] diamond 336 50.1 0.992015968063872 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30652997 30652997 PRJNA752572_P_NODE_1833_length_1456_cov_34.468684_g1705_i0 PRJNA752572 1833 1456 34.468684 501.86403904 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.3 1.63e-5   NR MBS1873370.1 1978231 g1705 i0 34.4 0.257554945054945 125 60 25.1 5 1017 1382 112 217 MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] diamond 375 59.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30653001 30653001 PRJNA752572_P_NODE_218813_length_179_cov_1.965278_g218306_i0 PRJNA752572 218813 179 1.965278 3.51784762 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 105 8.230000000000001e-26   NR HRC88013.1 2651171 g218306 i0 91.5 0.988826815642458 59 5 98.9 0 2 178 182 240 HRC88013.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 177 105 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30874333 30874333 PRJNA752572_P_NODE_7054_length_933_cov_5.278396_g6777_i0 PRJNA752572 7054 933 5.278396 49.24743468 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 330 5.169999999999999e-110   NR MFN7922683.1 2212468 g6777 i0 57.7 7.17684887459807 279 114 89.7 1 9 845 6 280 MFN7922683.1 aldolase/citrate lyase family protein [Bryobacteraceae bacterium] diamond 6696 330 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31064170 31064170 PRJNA752572_P_NODE_43115_length_416_cov_8.393701_g42610_i0 PRJNA752572 43115 416 8.393701 34.91779616 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 46.6 0.00956   NR HSY47318.1 2651171 g42610 i0 27.5 0.735576923076923 102 65 72.8 2 78 380 90 183 HSY47318.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 306 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31158333 31158333 PRJNA752572_P_NODE_178135_length_200_cov_1.393939_g177628_i0 PRJNA752572 178135 200 1.393939 2.787878 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 56.6 5.49e-8   NR HEX7296076.1 2283092 g177628 i0 45 0.9 60 33 90 0 6 185 16 75 HEX7296076.1 ankyrin repeat domain-containing protein [Pyrinomonadaceae bacterium] diamond 180 56.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31158339 31158339 PRJNA752572_P_NODE_238755_length_172_cov_0.963504_g238248_i0 PRJNA752572 238755 172 0.963504 1.65722688 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 76.6 9.8e-15   NR HZQ50917.1 2212468 g238248 i0 60.7 2.86046511627907 56 22 97.7 0 170 3 262 317 HZQ50917.1 LacI family DNA-binding transcriptional regulator [Bryobacteraceae bacterium] diamond 492 76.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31158342 31158342 PRJNA752572_P_NODE_249735_length_169_cov_0.985075_g249228_i0 PRJNA752572 249735 169 0.985075 1.66477675 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 115 1.45e-28   NR HXP22531.1 2771375 g249228 i0 98.2 0.976331360946746 55 1 97.6 0 3 167 193 247 HXP22531.1 M24 family metallopeptidase [Candidatus Sulfotelmatobacter sp.] diamond 165 115 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
32519238 32519238 PRJNA752572_P_NODE_260399_length_166_cov_1.030534_g259892_i0 PRJNA752572 260399 166 1.030534 1.71068644 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 76.6 1.35e-14   NR HSP33731.1 2651171 g259892 i0 73.9 2.4578313253012 46 12 83.1 0 28 165 2 47 HSP33731.1 homogentisate 1,2-dioxygenase [Thermoanaerobaculia bacterium] diamond 408 76.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;