RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA752572", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA752572 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11405189 11405189 PRJNA752572_P_NODE_30129_length_497_cov_1.809524_g29643_i0 PRJNA752572 30129 497 1.809524 8.99333428 Rozella allomycis CSF55 988480 Fungi Fungi 158 2.16e-41   NR EPZ34762.1 988480 g29643 i0 53.2 27.8812877263581 171 62 99.6 6 496 2 769 927 EPZ34762.1 DNA-directed RNA polymerase II subunit RPB2 [Rozella allomycis CSF55] diamond 13857 158 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28063499 28063499 PRJNA752572_P_NODE_193165_length_192_cov_0.993631_g192658_i0 PRJNA752572 193165 192 0.993631 1.90777152 Rozella allomycis CSF55 988480 Fungi Fungi 87.8 3.26e-19   NR EPZ30786.1 988480 g192658 i0 67.3 0.859375 55 17 84.4 1 163 2 161 215 EPZ30786.1 Ribosomal protein L22/L17, eukaryotic/archaeal domain-containing protein [Rozella allomycis CSF55] diamond 165 87.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29294936 29294936 PRJNA752572_P_NODE_125489_length_239_cov_13.362745_g124982_i0 PRJNA752572 125489 239 13.362745 31.93696055 Rozella allomycis CSF55 988480 Fungi Fungi 82 9.7e-17   NR EPZ34692.1 988480 g124982 i0 66.2 3.94142259414226 65 21 80.3 1 217 26 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;