contig_metadata
17 rows where bioproject = "PRJNA752572", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14757510 | 14757510 | PRJNA752572_P_NODE_242372_length_171_cov_0.970588_g241865_i0 | PRJNA752572 | 242372 | 171 | 0.970588 | 1.65970548 | Rubellicoccus peritrichatus | 3080537 | Bacteria | Bacteria | 182 | 1.75e-41 | NTclustered | gi|2605121622|gb|CP136920.1| | 3080537 | g241865 | i0 | 90.58 | 7.80701754385965 | 138 | 12 | 81 | 1 | 16 | 153 | 2162687 | 2162551 | Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome | blastn | 1335 | 182 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Rubellicoccus | Rubellicoccus peritrichatus | |
| 26957781 | 26957781 | PRJNA752572_P_NODE_4342_length_1120_cov_3.436866_g4131_i0 | PRJNA752572 | 4342 | 1120 | 3.436866 | 38.4928992 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 195 | 4.84e-53 | NR | HYG84357.1 | 2499141 | g4131 | i0 | 44.9 | 0.728571428571429 | 272 | 144 | 72.1 | 4 | 915 | 109 | 19 | 287 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 816 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27463799 | 27463799 | PRJNA752572_P_NODE_174463_length_202_cov_1.700599_g173956_i0 | PRJNA752572 | 174463 | 202 | 1.700599 | 3.43520998 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 46.6 | 9.6e-4 | NR | HYG84357.1 | 2499141 | g173956 | i0 | 40.3 | 1.99009900990099 | 67 | 40 | 99.5 | 0 | 1 | 201 | 360 | 426 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 402 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27600028 | 27600028 | PRJNA752572_P_NODE_251684_length_168_cov_1.496241_g251177_i0 | PRJNA752572 | 251684 | 168 | 1.496241 | 2.51368488 | Bacteria | 2 | Bacteria | Bacteria | 65.9 | 9.63e-11 | NR | MEM8954453.1 | 2026799 | g251177 | i0 | 53.6 | 2.96428571428571 | 56 | 26 | 100 | 0 | 1 | 168 | 99 | 154 | MEM8954453.1 SIS domain-containing protein [Verrucomicrobiota bacterium] | diamond | 498 | 65.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27621700 | 27621700 | PRJNA752572_P_NODE_45404_length_406_cov_1.787062_g44899_i0 | PRJNA752572 | 45404 | 406 | 1.787062 | 7.25547172 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 123 | 3.57e-32 | NR | MFL6530683.1 | 2201154 | g44899 | i0 | 47.2 | 9.18472906403941 | 127 | 67 | 93.8 | 0 | 403 | 23 | 83 | 209 | MFL6530683.1 2-oxoglutarate dehydrogenase E1 component [Chthoniobacterales bacterium] | diamond | 3729 | 123 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 28189647 | 28189647 | PRJNA752572_P_NODE_30206_length_496_cov_3.353579_g29720_i0 | PRJNA752572 | 30206 | 496 | 3.353579 | 16.63375184 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 175 | 2.25e-48 | NR | HYG84357.1 | 2499141 | g29720 | i0 | 66.7 | 1.63911290322581 | 141 | 46 | 85.3 | 1 | 488 | 66 | 388 | 527 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 813 | 175 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28632133 | 28632133 | PRJNA752572_P_NODE_34947_length_462_cov_4.229508_g34451_i0 | PRJNA752572 | 34947 | 462 | 4.229508 | 19.54032696 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 70.9 | 4.65e-11 | NR | HEX2748794.1 | 2026801 | g34451 | i0 | 44 | 2.46103896103896 | 109 | 53 | 66.9 | 4 | 377 | 69 | 271 | 377 | HEX2748794.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 1137 | 70.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 28663580 | 28663580 | PRJNA752572_P_NODE_55307_length_368_cov_1.420420_g54800_i0 | PRJNA752572 | 55307 | 368 | 1.42042 | 5.2271456 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 62 | 2.59e-8 | NR | HAE11661.1 | 2026771 | g54800 | i0 | 32 | 4.09239130434783 | 128 | 69 | 97.8 | 4 | 8 | 367 | 155 | 272 | HAE11661.1 hypothetical protein [Opitutia bacterium] | diamond | 1506 | 62 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 29137366 | 29137366 | PRJNA752572_P_NODE_237289_length_172_cov_1.474453_g236782_i0 | PRJNA752572 | 237289 | 172 | 1.474453 | 2.53605916 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 55.5 | 4.49e-7 | NR | HYG84357.1 | 2499141 | g236782 | i0 | 48.2 | 0.976744186046512 | 56 | 28 | 97.7 | 1 | 170 | 3 | 126 | 180 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 168 | 55.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 30210611 | 30210611 | PRJNA752572_P_NODE_223172_length_177_cov_2.225352_g222665_i0 | PRJNA752572 | 223172 | 177 | 2.225352 | 3.93887304 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 66.6 | 3.01e-11 | NR | MBE2212973.1 | 2006848 | g222665 | i0 | 63.4 | 2.08474576271186 | 41 | 15 | 69.5 | 0 | 2 | 124 | 21 | 61 | MBE2212973.1 thioredoxin [Opitutaceae bacterium] | diamond | 369 | 66.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30432424 | 30432424 | PRJNA752572_P_NODE_276233_length_162_cov_1.181102_g275726_i0 | PRJNA752572 | 276233 | 162 | 1.181102 | 1.91338524 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 77.8 | 2.52e-16 | NR | MAH13224.1 | 2026799 | g275726 | i0 | 68.8 | 0.888888888888889 | 48 | 15 | 88.9 | 0 | 9 | 152 | 113 | 160 | MAH13224.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 144 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30748018 | 30748018 | PRJNA752572_P_NODE_94014_length_279_cov_1.963115_g93507_i0 | PRJNA752572 | 94014 | 279 | 1.963115 | 5.47709085 | Pedosphaera sp. | 2024890 | Bacteria | Bacteria | 96.3 | 8.75e-21 | NR | MDB6123053.1 | 2024890 | g93507 | i0 | 66.7 | 13.1505376344086 | 72 | 21 | 77.4 | 1 | 218 | 3 | 345 | 413 | MDB6123053.1 glycine dehydrogenase [Pedosphaera sp.] | diamond | 3669 | 96.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera sp. | |
| 31253516 | 31253516 | PRJNA752572_P_NODE_137895_length_228_cov_1.839378_g137388_i0 | PRJNA752572 | 137895 | 228 | 1.839378 | 4.19378184 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 55.1 | 1.39e-6 | NR | MDG2170390.1 | 2026772 | g137388 | i0 | 44.4 | 1.89473684210526 | 72 | 34 | 88.2 | 2 | 1 | 201 | 299 | 369 | MDG2170390.1 hypothetical protein [Opitutales bacterium] | diamond | 432 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 31411760 | 31411760 | PRJNA752572_P_NODE_89576_length_286_cov_2.637450_g89069_i0 | PRJNA752572 | 89576 | 286 | 2.63745 | 7.543107 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 50.8 | 8.49e-5 | NR | MEJ6601053.1 | 2006848 | g89069 | i0 | 38.5 | 0.954545454545455 | 91 | 48 | 91.3 | 3 | 274 | 14 | 144 | 230 | MEJ6601053.1 sulfite reductase subunit alpha [Opitutaceae bacterium] | diamond | 273 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 32519237 | 32519237 | PRJNA752572_P_NODE_258479_length_166_cov_2.129771_g257972_i0 | PRJNA752572 | 258479 | 166 | 2.129771 | 3.53541986 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 42 | 0.0256 | NR | MBL9136815.1 | 2026801 | g257972 | i0 | 37 | 0.975903614457831 | 54 | 34 | 97.6 | 0 | 2 | 163 | 1577 | 1630 | MBL9136815.1 S8 family serine peptidase [Verrucomicrobiales bacterium] | diamond | 162 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32550916 | 32550916 | PRJNA752572_P_NODE_278499_length_161_cov_2.103175_g277992_i0 | PRJNA752572 | 278499 | 161 | 2.103175 | 3.38611175 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57.8 | 4.06e-8 | NR | MEY4482797.1 | 2026799 | g277992 | i0 | 60.8 | 8.49689440993789 | 51 | 14 | 95 | 2 | 155 | 3 | 25 | 69 | MEY4482797.1 ADP-forming succinate--CoA ligase subunit beta [Verrucomicrobiota bacterium] | diamond | 1368 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32582336 | 32582336 | PRJNA752572_P_NODE_276739_length_162_cov_1.039370_g276232_i0 | PRJNA752572 | 276739 | 162 | 1.03937 | 1.6837794 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 110 | 1.53e-27 | NR | WP_397379307.1 | 1965333 | g276232 | i0 | 92.5 | 0.981481481481482 | 53 | 4 | 98.1 | 0 | 2 | 160 | 116 | 168 | WP_397379307.1 phosphotransferase family protein [Prosthecobacter sp.] | diamond | 159 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;