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contig_metadata

29 rows where bioproject = "PRJNA752572" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 29 ✖

bioproject 1

  • PRJNA752572 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2004693 2004693 PRJNA752572_P_NODE_77382_length_309_cov_2.072993_g76875_i0 PRJNA752572 77382 309 2.072993 6.40554837 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 337 7.11e-88   NTclustered gi|2546137839|emb|OY282432.1| 3036252 g76875 i0 89.811 288.462783171521 265 23 85 4 46 309 2261314 2261053 MAG: uncultured Candidatus Binatia bacterium isolate 81991fb1-66cf-4eb3-b653-309a223604dd genome assembly, chromosome: 1 blastn 89135 337 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
9657062 9657062 PRJNA752572_P_NODE_180748_length_198_cov_2.527607_g180241_i0 PRJNA752572 180748 198 2.527607 5.00466186 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 220 4.45e-53   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g180241 i0 86.765 88.7020202020202 204 20 100 4 1 198 3395611 3395813 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 17563 220 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
9657070 9657070 PRJNA752572_P_NODE_210488_length_183_cov_1.608108_g209981_i0 PRJNA752572 210488 183 1.608108 2.94283764 Patescibacteria group bacterium 2052139 Bacteria Bacteria 78.2 5.27e-15   NR MFA7286096.1 2052139 g209981 i0 57.1 4.39344262295082 56 24 91.8 0 11 178 150 205 MFA7286096.1 translation initiation factor IF-2 [Patescibacteria group bacterium] diamond 804 78.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27147243 27147243 PRJNA752572_P_NODE_221602_length_178_cov_1.503497_g221095_i0 PRJNA752572 221602 178 1.503497 2.67622466 Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19 1797994 Bacteria Bacteria 54.7 9.38e-7   NR OGF27936.1 1797994 g221095 i0 62.2 2.81460674157303 37 14 62.4 0 40 150 312 348 OGF27936.1 MAG: malate dehydrogenase [Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19] diamond 501 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19
27621683 27621683 PRJNA752572_P_NODE_186424_length_195_cov_2.018750_g185917_i0 PRJNA752572 186424 195 2.01875 3.9365625 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.00613   NR MDR3548414.1 2053589 g185917 i0 32.7 0.846153846153846 55 37 84.6 0 166 2 50 104 MDR3548414.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27726555 27726555 PRJNA752572_P_NODE_57024_length_362_cov_2.327217_g56517_i0 PRJNA752572 57024 362 2.327217 8.42452554 Bacteria 2 Bacteria Bacteria 104 1.15e-25   NR KKS93917.1 1618826 g56517 i0 45.1 1.87292817679558 113 61 93.6 1 1 339 3 114 KKS93917.1 MAG: ABC-type multidrug transport system, ATPase component [Parcubacteria group bacterium GW2011_GWA2_43_13] diamond 678 104 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWA2_43_13
28104884 28104884 PRJNA752572_P_NODE_149585_length_219_cov_1.081522_g149078_i0 PRJNA752572 149585 219 1.081522 2.36853318 Pseudomonadati 3379134 Bacteria Bacteria 58.9 1.64e-8   NR MCA9309021.1 2026720 g149078 i0 56.9 1.50684931506849 51 21 69.9 1 65 217 58 107 MCA9309021.1 ferritin-like domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 330 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28262734 28262734 PRJNA752572_P_NODE_12986_length_729_cov_2.554755_g12605_i0 PRJNA752572 12986 729 2.554755 18.62416395 Bacteria 2 Bacteria Bacteria 194 1.4299999999999995e-55   NR RTL04278.1 2030827 g12605 i0 58.2 2.39506172839506 146 61 60.1 0 6 443 317 462 RTL04278.1 MAG: deoxyribodipyrimidine photo-lyase [Candidatus Dependentiae bacterium] diamond 1746 194 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
28316228 28316228 PRJNA752572_P_NODE_157266_length_213_cov_2.000000_g156759_i0 PRJNA752572 157266 213 2 4.26 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 67 3.33e-11   NR HRN71286.1 2026804 g156759 i0 51.5 0.957746478873239 68 33 95.8 0 9 212 88 155 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 204 67 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
28442621 28442621 PRJNA752572_P_NODE_277326_length_162_cov_1.039370_g276819_i0 PRJNA752572 277326 162 1.03937 1.6837794 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 62.4 1.41e-9   NR HVM74167.1 2973664 g276819 i0 75.7 0.685185185185185 37 9 68.5 0 3 113 444 480 HVM74167.1 NrfD/PsrC family molybdoenzyme membrane anchor subunit [Candidatus Saccharimonadales bacterium] diamond 111 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28568691 28568691 PRJNA752572_P_NODE_234027_length_173_cov_1.413043_g233520_i0 PRJNA752572 234027 173 1.413043 2.44456439 candidate division CSSED10-310 bacterium 2855610 Bacteria Bacteria 41.6 0.0376   NR MBN2053344.1 2855610 g233520 i0 44.1 0.589595375722543 34 19 59 0 157 56 258 291 MBN2053344.1 alkaline phosphatase family protein [candidate division CSSED10-310 bacterium] diamond 102 41.6 1 Bacteria Bacteria candidate phyla   candidate division CSSED10-310         candidate division CSSED10-310 bacterium
28600457 28600457 PRJNA752572_P_NODE_46487_length_401_cov_2.183060_g45982_i0 PRJNA752572 46487 401 2.18306 8.7540706 Patescibacteria group bacterium 2052139 Bacteria Bacteria 99 6.58e-22   NR MFN3301429.1 2052139 g45982 i0 80 1.23441396508728 55 11 41.1 0 400 236 143 197 MFN3301429.1 NAD-dependent epimerase/dehydratase family protein [Patescibacteria group bacterium] diamond 495 99 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28947916 28947916 PRJNA752572_P_NODE_268028_length_164_cov_1.240310_g267521_i0 PRJNA752572 268028 164 1.24031 2.0341084 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.00497   NR MDR3549369.1 2053589 g267521 i0 43.4 1.48170731707317 53 23 89.6 3 17 163 170 219 MDR3549369.1 phospholipid scramblase-related protein [Candidatus Paceibacterota bacterium] diamond 243 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29074142 29074142 PRJNA752572_P_NODE_212208_length_182_cov_1.925170_g211701_i0 PRJNA752572 212208 182 1.92517 3.5038094 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 41.6 0.0244   NR MCK5827976.1 2306012 g211701 i0 42.3 0.857142857142857 52 29 84.1 1 182 30 48 99 MCK5827976.1 hypothetical protein [Candidatus Bipolaricaulota bacterium] diamond 156 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
30179120 30179120 PRJNA752572_P_NODE_240052_length_171_cov_2.066176_g239545_i0 PRJNA752572 240052 171 2.066176 3.53316096 Patescibacteria group bacterium 2052139 Bacteria Bacteria 53.9 2.5e-7   NR MBU0978871.1 2052139 g239545 i0 41.8 4.57894736842105 55 32 96.5 0 2 166 19 73 MBU0978871.1 RNA-binding protein [Patescibacteria group bacterium] diamond 783 53.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30684656 30684656 PRJNA752572_P_NODE_268613_length_164_cov_1.023256_g268106_i0 PRJNA752572 268613 164 1.023256 1.67813984 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 106 2.37e-25   NR HTZ31504.1 2072417 g268106 i0 94.4 1.97560975609756 54 3 98.8 0 162 1 214 267 HTZ31504.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Candidatus Methylomirabilota bacterium] diamond 324 106 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31000837 31000837 PRJNA752572_P_NODE_200994_length_188_cov_1.045752_g200487_i0 PRJNA752572 200994 188 1.045752 1.96601376 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 4.24e-6   NR MDR3548581.1 2053589 g200487 i0 50.9 0.845744680851064 53 24 84.6 1 186 28 110 160 MDR3548581.1 methyltransferase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 159 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31042564 31042564 PRJNA752572_P_NODE_132275_length_233_cov_1.868687_g131768_i0 PRJNA752572 132275 233 1.868687 4.35404071 Bacteria 2 Bacteria Bacteria 72 5.32e-13   NR MDF2379084.1 2044595 g131768 i0 50 15.6695278969957 76 38 97.9 0 6 233 98 173 MDF2379084.1 slipin family protein [Candidatus Altimarinota bacterium] diamond 3651 72 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31285065 31285065 PRJNA752572_P_NODE_14675_length_691_cov_6.280488_g14277_i0 PRJNA752572 14675 691 6.280488 43.39817208 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 174 1.99e-50   NR NBP56350.1 2802965 g14277 i0 52.3 2.50072358900145 193 92 83.8 0 580 2 52 244 NBP56350.1 GTP cyclohydrolase I [Candidatus Elulimicrobium humile] diamond 1728 174 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31380192 31380192 PRJNA752572_P_NODE_176556_length_201_cov_1.204819_g176049_i0 PRJNA752572 176556 201 1.204819 2.42168619 Patescibacteria group bacterium 2052139 Bacteria Bacteria 72.8 5.24e-13   NR MEM9336914.1 2052139 g176049 i0 52.2 1 67 31 98.5 1 2 199 3 69 MEM9336914.1 deoxyribodipyrimidine photo-lyase [Patescibacteria group bacterium] diamond 201 72.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31538367 31538367 PRJNA752572_P_NODE_133196_length_232_cov_2.223350_g132689_i0 PRJNA752572 133196 232 2.22335 5.158172 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 53.1 5.51e-6   NR HRN71286.1 2026804 g132689 i0 31.8 1.09913793103448 85 49 98.3 1 232 5 155 239 HRN71286.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 255 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31538396 31538396 PRJNA752572_P_NODE_66396_length_334_cov_2.792642_g65889_i0 PRJNA752572 66396 334 2.792642 9.32742428 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 56.2 1.35e-6   NR RTL06913.1 2030827 g65889 i0 46 0.565868263473054 63 34 56.6 0 194 6 15 77 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 189 56.2 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
31854457 31854457 PRJNA752572_P_NODE_92957_length_281_cov_1.475610_g92450_i0 PRJNA752572 92957 281 1.47561 4.1464641 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 65.5 6.09e-10   NR MFC1744729.1 2053586 g92450 i0 46.7 5.58362989323843 60 32 64.1 0 281 102 222 281 MFC1744729.1 tectonin domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 1569 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
31980926 31980926 PRJNA752572_P_NODE_11638_length_763_cov_2.541209_g11274_i0 PRJNA752572 11638 763 2.541209 19.38942467 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 89.7 2.75e-17   NR RTL06913.1 2030827 g11274 i0 32.7 0.648754914809961 165 104 63.3 3 9 491 76 237 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 495 89.7 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
32234504 32234504 PRJNA752572_P_NODE_81898_length_300_cov_2.147170_g81391_i0 PRJNA752572 81898 300 2.14717 6.44151 Minisyncoccota bacterium 2053589 Bacteria Bacteria 121 2.59e-33   NR MDR3549538.1 2053589 g81391 i0 64 0.86 86 31 86 0 42 299 8 93 MDR3549538.1 small nuclear ribonucleoprotein Sm D2 [Candidatus Paceibacterota bacterium] diamond 258 121 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32497396 32497396 PRJNA752572_P_NODE_64019_length_341_cov_1.584967_g63512_i0 PRJNA752572 64019 341 1.584967 5.40473747 Bacteria 2 Bacteria Bacteria 108 1.77e-25   NR MCS7245191.1 2052148 g63512 i0 48.7 3.97653958944282 113 52 99.4 2 340 2 288 394 MCS7245191.1 ornithine--oxo-acid transaminase [candidate division WOR-3 bacterium] diamond 1356 108 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32676431 32676431 PRJNA752572_P_NODE_122300_length_243_cov_1.605769_g121793_i0 PRJNA752572 122300 243 1.605769 3.90201867 Candidatus Peregrinibacteria bacterium CG1 2030811 Bacteria Bacteria 52.4 5.11e-6   NR PIR51834.1 1974788 g121793 i0 45.7 2.46913580246914 70 36 84 1 1 204 17 86 PIR51834.1 MAG: 50S ribosomal protein L24 [Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_49_16] diamond 600 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_49_16
32802499 32802499 PRJNA752572_P_NODE_67860_length_330_cov_3.650847_g67353_i0 PRJNA752572 67860 330 3.650847 12.0477951 Candidatus Kuenenbacteria bacterium 2699743 Bacteria Bacteria 43.1 0.0499   NR NMB48799.1 2699743 g67353 i0 38.3 0.427272727272727 47 27 42.7 1 254 114 45 89 NMB48799.1 hypothetical protein [Candidatus Kuenenbacteria bacterium] diamond 141 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium
32865522 32865522 PRJNA752572_P_NODE_92180_length_282_cov_1.757085_g91673_i0 PRJNA752572 92180 282 1.757085 4.9549797 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 79.3 7.31e-15   NR HDT13446.1 2052149 g91673 i0 51.8 1.80851063829787 85 38 89.4 2 253 2 188 270 HDT13446.1 deoxyribodipyrimidine photo-lyase [Candidatus Aminicenantes bacterium] diamond 510 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;