RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA752278", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA752278 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29178690 29178690 PRJNA752278_P_NODE_74569_length_254_cov_0.928177_g74366_i0 PRJNA752278 74569 254 0.928177 2.35756958 Archaea 2157 Archaea Archaea 109 4.67e-26   NR NMC05547.1 2053489 g74366 i0 70.7 1.9488188976378 82 24 96.9 0 250 5 117 198 NMC05547.1 acetyl-CoA C-acetyltransferase [Promethearchaeota archaeon] diamond 495 109 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31316789 31316789 PRJNA752278_P_NODE_9475_length_463_cov_3.828205_g9272_i0 PRJNA752278 9475 463 3.828205 17.72458915 Promethearchaeum syntrophicum 2594042 Archaea Archaea 47.8 0.00298   NR WP_147663947.1 2594042 g9272 i0 30.6 1.69114470842333 121 79 77.1 3 48 404 26 143 WP_147663947.1 Rab family GTPase [Promethearchaeum syntrophicum] diamond 783 47.8 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Promethearchaeum Promethearchaeum syntrophicum
32802475 32802475 PRJNA752278_P_NODE_99820_length_243_cov_0.905882_g99617_i0 PRJNA752278 99820 243 0.905882 2.20129326 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 50.1 2.43e-5   NR OLS12533.1 1849166 g99617 i0 35.8 1 81 49 100 2 243 1 9 86 OLS12533.1 MAG: hypothetical protein RBG13Loki_3844 [Promethearchaeota archaeon CR_4] diamond 243 50.1 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;