RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA752278" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA752278 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19854898 19854898 PRJNA752278_P_NODE_60476_length_267_cov_1.670103_g60273_i0 PRJNA752278 60476 267 1.670103 4.45917501 Varroa dicistrovirus 1 2873561 Viruses Viruses 457 4.43e-124   NTclustered gi|2111829789|gb|MZ822069.1| 2873561 g60273 i0 97.398 1.00749063670412 269 5 100 2 1 267 10076 9808 MAG: Varroa dicistrovirus 1 isolate No3-Mi012-HB2018-11, complete genome blastn 269 457 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Varroa dicistrovirus 1
27179041 27179041 PRJNA752278_P_NODE_2_length_6190_cov_6.803498_g1_i0 PRJNA752278 2 6190 6.803498 421.1365262 Qianjiang dicistro-like virus 113 3347367 Viruses Viruses 701 8.789999999999997e-209   NR XHA87929.1 3347367 g1 i0 44.2 0.439095315024233 906 443 41.5 14 923 3493 752 1643 XHA87929.1 MAG: polyprotein [Qianjiang dicistro-like virus 113] diamond 2718 701 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Qianjiang dicistro-like virus 113
30842812 30842812 PRJNA752278_P_NODE_60874_length_267_cov_1.345361_g60671_i0 PRJNA752278 60874 267 1.345361 3.59211387 Plasmopara viticola lesion associated picorna-like virus 1 2692077 Viruses Viruses 133 3.34e-34   NR QHD64723.1 2692077 g60671 i0 69.3 0.98876404494382 88 27 98.9 0 2 265 5 92 QHD64723.1 RdRp [Plasmopara viticola lesion associated picorna-like virus 1] diamond 264 133 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Plasmopara viticola lesion associated picorna-like virus 1
32519151 32519151 PRJNA752278_P_NODE_139_length_2060_cov_5.405637_g102_i0 PRJNA752278 139 2060 5.405637 111.3561222 Qianjiang dicistro-like virus 113 3347367 Viruses Viruses 412 5.27e-122   NR XHA87929.1 3347367 g102 i0 40.3 0.88252427184466 606 335 85.3 8 1779 22 47 645 XHA87929.1 MAG: polyprotein [Qianjiang dicistro-like virus 113] diamond 1818 412 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Qianjiang dicistro-like virus 113

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;