RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA752278" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25427227 25427227 PRJNA752278_P_NODE_13000_length_414_cov_0.900293_g12797_i0 PRJNA752278 13000 414 0.900293 3.72721302 Pseudomonadati 3379134 Bacteria Bacteria 168 3.2e-45   NR MCS6772066.1 2212473 g12797 i0 60.6 30.5217391304348 137 54 99.3 0 412 2 380 516 MCS6772066.1 methionine synthase [Kiritimatiellia bacterium] diamond 12636 169 0.994082840236686 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30021397 30021397 PRJNA752278_P_NODE_70151_length_258_cov_1.491892_g69948_i0 PRJNA752278 70151 258 1.491892 3.84908136 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.1 0.0262   NR MCR5839001.1 2212473 g69948 i0 51.3 0.906976744186046 39 19 45.3 0 17 133 9 47 MCR5839001.1 papain-like cysteine peptidase [Kiritimatiellia bacterium] diamond 234 43.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;