RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA752278" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28442567 28442567 PRJNA752278_P_NODE_42146_length_285_cov_1.089623_g41943_i0 PRJNA752278 42146 285 1.089623 3.10542555 Balneolaceae bacterium 2053516 Bacteria Bacteria 53.5 7.49e-6   NR TVR27879.1 2053516 g41943 i0 60 2.29473684210526 40 15 42.1 1 165 284 19 57 TVR27879.1 MAG: hypothetical protein EA390_13210 [Balneolaceae bacterium] diamond 654 53.5 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
32234447 32234447 PRJNA752278_P_NODE_56698_length_271_cov_1.267677_g56495_i0 PRJNA752278 56698 271 1.267677 3.43540467 Balneolaceae bacterium 2053516 Bacteria Bacteria 67.8 5.53e-12   NR MEQ9309648.1 2053516 g56495 i0 48.5 2.23616236162362 68 33 73.1 1 60 257 16 83 MEQ9309648.1 Hsp20/alpha crystallin family protein [Balneolaceae bacterium] diamond 606 67.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;