RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA752278", tax_kingdom = "Thermoproteati" and tax_phylum = "Candidatus Bathyarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bathyarchaeota · 1 ✖

tax_kingdom 1

  • Thermoproteati · 1 ✖

bioproject 1

  • PRJNA752278 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27947183 27947183 PRJNA752278_P_NODE_100645_length_242_cov_2.242604_g100442_i0 PRJNA752278 100645 242 2.242604 5.42710168 root 1 Root_unresolved Root_unresolved 56.6 4.42e-7   NR MCS7120705.1 2026714 g100442 i0 50.8 9.16115702479339 61 29 75.6 1 1 183 290 349 MCS7120705.1 L-threonylcarbamoyladenylate synthase [Candidatus Bathyarchaeota archaeon] diamond 2217 56.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;