RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA752278", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA752278 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28505509 28505509 PRJNA752278_P_NODE_101587_length_242_cov_0.911243_g101384_i0 PRJNA752278 101587 242 0.911243 2.20520806 Olpidium bornovanus 278681 Fungi Fungi 49.7 7.81e-5   NR KAG5460835.1 278681 g101384 i0 49.1 0.706611570247934 57 26 66.9 1 241 80 92 148 KAG5460835.1 MAG: hypothetical protein BJ554DRAFT_7069, partial [Olpidium bornovanus] diamond 171 49.7 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31706198 31706198 PRJNA752278_P_NODE_16057_length_383_cov_5.461290_g15854_i0 PRJNA752278 16057 383 5.46129 20.9167407 Eukaryota 2759 Fungi Fungi 129 7.150000000000001e-36   NR KAG5461717.1 278681 g15854 i0 62.8 2.33420365535248 94 35 73.6 0 101 382 2 95 KAG5461717.1 MAG: 60S ribosomal protein L33-A-like protein [Olpidium bornovanus] diamond 894 130 0.992307692307692 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
32297842 32297842 PRJNA752278_P_NODE_71219_length_257_cov_1.532609_g71016_i0 PRJNA752278 71219 257 1.532609 3.93880513 Olpidium bornovanus 278681 Fungi Fungi 44.3 0.011   NR KAG5463594.1 278681 g71016 i0 45.9 0.431906614785992 37 18 43.2 1 9 119 216 250 KAG5463594.1 MAG: hypothetical protein BJ554DRAFT_6192 [Olpidium bornovanus] diamond 111 44.3 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;