RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA752278", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 8 ✖

tax_kingdom 1

  • Fungi · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA752278 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10931404 10931404 PRJNA752278_P_NODE_389_length_1531_cov_3.451989_g295_i0 PRJNA752278 389 1531 3.451989 52.84995159 Rozella allomycis CSF55 988480 Fungi Fungi 457 1.3999999999999997e-151   NR RKP19201.1 988480 g295 i0 46.6 0.946440235140431 483 249 93.5 5 1487 57 170 649 RKP19201.1 acetyl-CoA synthetase-like protein [Rozella allomycis CSF55] diamond 1449 457 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26989279 26989279 PRJNA752278_P_NODE_25522_length_325_cov_1.222222_g25319_i0 PRJNA752278 25522 325 1.222222 3.9722215 Rozella allomycis CSF55 988480 Fungi Fungi 132 3.4099999999999996e-37   NR EPZ31907.1 988480 g25319 i0 64.4 7.45846153846154 104 37 96 0 325 14 27 130 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 2424 132 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26989321 26989321 PRJNA752278_P_NODE_92942_length_245_cov_1.732558_g92739_i0 PRJNA752278 92942 245 1.732558 4.2447671 Rozella allomycis CSF55 988480 Fungi Fungi 53.5 5.9e-6   NR RKP16397.1 988480 g92739 i0 32.1 1.98367346938776 81 55 99.2 0 243 1 147 227 RKP16397.1 hypothetical protein ROZALSC1DRAFT_25327, partial [Rozella allomycis CSF55] diamond 486 53.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27242430 27242430 PRJNA752278_P_NODE_4803_length_592_cov_4.429672_g4602_i0 PRJNA752278 4803 592 4.429672 26.22365824 Rozella allomycis CSF55 988480 Fungi Fungi 177 3.45e-53   NR EPZ33737.1 988480 g4602 i0 64.2 1.35810810810811 134 44 65.9 2 59 448 11 144 EPZ33737.1 40S ribosomal protein S15 [Rozella allomycis CSF55] diamond 804 177 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27400594 27400594 PRJNA752278_P_NODE_33943_length_296_cov_1.730942_g33740_i0 PRJNA752278 33943 296 1.730942 5.12358832 Rozella allomycis CSF55 988480 Fungi Fungi 76.6 2.22e-14   NR EPZ33474.1 988480 g33740 i0 57.1 1.40878378378378 63 27 63.9 0 296 108 183 245 EPZ33474.1 40S ribosomal protein S2 [Rozella allomycis CSF55] diamond 417 76.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30463960 30463960 PRJNA752278_P_NODE_15673_length_387_cov_1.627389_g15470_i0 PRJNA752278 15673 387 1.627389 6.29799543 Rozella allomycis CSF55 988480 Fungi Fungi 61.6 4.4e-8   NR RKP19710.1 988480 g15470 i0 49.2 0.472868217054264 61 31 47.3 0 313 131 337 397 RKP19710.1 Dbl homology domain-containing protein [Rozella allomycis CSF55] diamond 183 61.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32107565 32107565 PRJNA752278_P_NODE_60298_length_267_cov_2.134021_g60095_i0 PRJNA752278 60298 267 2.134021 5.69783607 Rozella allomycis CSF55 988480 Fungi Fungi 47 0.00159   NR EPZ33727.1 988480 g60095 i0 47.2 0.595505617977528 53 28 59.6 0 81 239 672 724 EPZ33727.1 Rho guanine nucleotide exchange factor scd1 and CDC24-like protein [Rozella allomycis CSF55] diamond 159 47 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32107568 32107568 PRJNA752278_P_NODE_68818_length_259_cov_1.913978_g68615_i0 PRJNA752278 68818 259 1.913978 4.95720302 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 85.5 4.08e-17   NR PJF19231.1 1246581 g68615 i0 50 0.88030888030888 76 36 88 1 230 3 1387 1460 PJF19231.1 Aminoacyl-tRNA synthetase, class Ia domain-containing protein [Paramicrosporidium saccamoebae] diamond 228 85.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;