RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA752278", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA752278 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31263445 31263445 PRJNA752278_P_NODE_95775_length_244_cov_1.567251_g95572_i0 PRJNA752278 95775 244 1.567251 3.82409244 Bacteria 2 Bacteria Bacteria 54.3 8.27e-7   NR HWW15987.1 2052315 g95572 i0 46.8 3.06147540983607 62 33 76.2 0 3 188 80 141 HWW15987.1 cyclic nucleotide-binding domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 747 54.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31358405 31358405 PRJNA752278_P_NODE_86536_length_248_cov_0.880000_g86333_i0 PRJNA752278 86536 248 0.88 2.1824 Bacillati 1783272 Bacteria Bacteria 105 4.51e-24   NR HSS92429.1 2052315 g86333 i0 67.9 5.73387096774194 78 25 94.4 0 11 244 196 273 HSS92429.1 LuxR C-terminal-related transcriptional regulator [Candidatus Dormiibacterota bacterium] diamond 1422 105 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31727837 31727837 PRJNA752278_P_NODE_49277_length_278_cov_1.317073_g49074_i0 PRJNA752278 49277 278 1.317073 3.66146294 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 43.1 0.0377   NR HVS48660.1 2052315 g49074 i0 28.9 0.89568345323741 83 54 85.3 2 275 39 2 83 HVS48660.1 fumarylacetoacetate hydrolase family protein [Candidatus Dormiibacterota bacterium] diamond 249 43.1 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;