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contig_metadata

9 rows where bioproject = "PRJNA752278", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJNA752278 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24954841 24954841 PRJNA752278_P_NODE_85620_length_248_cov_0.880000_g85417_i0 PRJNA752278 85620 248 0.88 2.1824 Armatimonadota bacterium 2033014 Bacteria Bacteria 161 2.44e-47   NR MBM3460133.1 2033014 g85417 i0 81.7 1.98387096774194 82 15 99.2 0 247 2 178 259 MBM3460133.1 DUF1549 domain-containing protein [Armatimonadota bacterium] diamond 492 161 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26641255 26641255 PRJNA752278_P_NODE_2541_length_749_cov_1.213018_g2353_i0 PRJNA752278 2541 749 1.213018 9.08550482 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 55.8 6.3e-5   NR HLK59180.1 2739509 g2353 i0 42.9 0.700934579439252 70 40 28 0 662 453 162 231 HLK59180.1 ankyrin repeat domain-containing protein [Chthonomonadaceae bacterium] diamond 525 55.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27400612 27400612 PRJNA752278_P_NODE_53783_length_273_cov_2.800000_g53580_i0 PRJNA752278 53783 273 2.8 7.644 Armatimonas sp. 1872638 Bacteria Bacteria 52.4 4.75e-6   NR WP_395088970.1 1872638 g53580 i0 65.1 0.472527472527473 43 15 47.3 0 129 1 1 43 WP_395088970.1 helix-turn-helix domain-containing protein [Armatimonas sp.] diamond 129 52.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
27558125 27558125 PRJNA752278_P_NODE_2944_length_707_cov_1.611987_g2753_i0 PRJNA752278 2944 707 1.611987 11.396748090000001 Armatimonadota bacterium 2033014 Bacteria Bacteria 56.6 1.96e-6   NR HEY3378629.1 2033014 g2753 i0 45.9 0.258840169731259 61 33 25.9 0 638 456 25 85 HEY3378629.1 ankyrin repeat domain-containing protein [Armatimonadota bacterium] diamond 183 56.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27600011 27600011 PRJNA752278_P_NODE_7304_length_509_cov_2.674312_g7101_i0 PRJNA752278 7304 509 2.674312 13.61224808 Bacteria 2 Bacteria Bacteria 141 5.109999999999999e-40   NR WP_184192813.1 685828 g7101 i0 55.5 7.19056974459725 119 51 69 1 397 47 3 121 WP_184192813.1 group I truncated hemoglobin [Armatimonas rosea] diamond 3660 142 0.992957746478873 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
30337663 30337663 PRJNA752278_P_NODE_79672_length_250_cov_1.740113_g79469_i0 PRJNA752278 79672 250 1.740113 4.3502825 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 50.8 3.41e-5   NR HLJ56773.1 2739509 g79469 i0 57.9 0.456 38 16 45.6 0 245 132 26 63 HLJ56773.1 tetratricopeptide repeat protein [Chthonomonadaceae bacterium] diamond 114 50.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30400860 30400860 PRJNA752278_P_NODE_75473_length_253_cov_1.322222_g75270_i0 PRJNA752278 75473 253 1.322222 3.34522166 Fimbriimonas sp. 1936159 Bacteria Bacteria 43.9 0.0159   NR MDR3688675.1 1936159 g75270 i0 43.9 0.675889328063241 57 27 61.7 2 171 16 6 62 MDR3688675.1 methylmalonyl Co-A mutase-associated GTPase MeaB [Fimbriimonas sp.] diamond 171 43.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30811097 30811097 PRJNA752278_P_NODE_31574_length_304_cov_6.813853_g31371_i0 PRJNA752278 31574 304 6.813853 20.71411312 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.2 9.66e-15   NR MCX6344657.1 2033014 g31371 i0 52 0.740131578947368 75 36 74 0 225 1 2 76 MCX6344657.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Armatimonadota bacterium] diamond 225 78.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32202562 32202562 PRJNA752278_P_NODE_84158_length_249_cov_0.875000_g83955_i0 PRJNA752278 84158 249 0.875 2.17875 Armatimonadota bacterium 2033014 Bacteria Bacteria 52 2.24e-5   NR MEI6501742.1 2033014 g83955 i0 38.4 0.879518072289157 73 45 88 0 219 1 26 98 MEI6501742.1 hypothetical protein [Armatimonadota bacterium] diamond 219 52 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;