RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA752278", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18578638 18578638 PRJNA752278_P_NODE_1315_length_959_cov_2.563205_g1150_i0 PRJNA752278 1315 959 2.563205 24.58113595 Victivallales bacterium 2212475 Bacteria Bacteria 155 1.1e-42   NR MBN1863804.1 2212475 g1150 i0 63.2 3.61001042752868 114 42 35.7 0 6 347 46 159 MBN1863804.1 glutathione peroxidase [Victivallales bacterium] diamond 3462 155 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
28632063 28632063 PRJNA752278_P_NODE_19107_length_361_cov_1.569444_g18904_i0 PRJNA752278 19107 361 1.569444 5.66569284 Lentisphaeria bacterium 2053569 Bacteria Bacteria 49.3 7.2e-4   NR MBQ4106282.1 2053569 g18904 i0 52.5 0.490304709141274 59 25 46.5 2 181 14 384 442 MBQ4106282.1 hypothetical protein [Lentisphaeria bacterium] diamond 177 49.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;