RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA752278", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA752278 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
726933 726933 PRJNA752278_P_NODE_1561_length_895_cov_7.352798_g1388_i0 PRJNA752278 1561 895 7.352798 65.8075421 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 508 4.46e-139   NTclustered gi|339759377|dbj|AB600301.1| 926446 g1388 i0 79.888 78.7776536312849 716 127 79 14 189 895 1279 572 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 70506 508 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
23680484 23680484 PRJNA752278_P_NODE_42519_length_284_cov_1.886256_g42316_i0 PRJNA752278 42519 284 1.886256 5.35696704 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 375 1.3699999999999999e-99   NTclustered gi|339759363|dbj|AB600294.1| 201153 g42316 i0 90.493 98.0492957746479 284 27 100 0 1 284 33 316 Carpediemonas membranifera gene for alpha-tubulin, partial cds, strain: BICM blastn 27846 375 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
26704393 26704393 PRJNA752278_P_NODE_261_length_1687_cov_11.786865_g198_i0 PRJNA752278 261 1687 11.786865 198.84441255 Kipferlia bialata 797122 Fornicata other_Eukaryota 52 0.0103   NR GIQ80334.1 797122 g198 i0 30.2 0.83402489626556 281 144 43.4 13 1582 851 1029 1294 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 1407 52 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
26735909 26735909 PRJNA752278_P_NODE_85801_length_248_cov_0.880000_g85598_i0 PRJNA752278 85801 248 0.88 2.1824 Kipferlia bialata 797122 Fornicata other_Eukaryota 47.4 8.55e-4   NR GIQ82399.1 797122 g85598 i0 38 0.955645161290323 79 43 91.9 2 240 13 143 218 GIQ82399.1 hypothetical protein KIPB_003529 [Kipferlia bialata] diamond 237 47.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
27852331 27852331 PRJNA752278_P_NODE_304_length_1622_cov_4.054229_g231_i0 PRJNA752278 304 1622 4.054229 65.75959438 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.5 6.12e-4   NR ESU40623.1 5741 g231 i0 29.5 0.599260172626387 193 106 34.4 8 906 1463 318 487 ESU40623.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 972 55.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
28221222 28221222 PRJNA752278_P_NODE_30886_length_307_cov_2.602564_g30683_i0 PRJNA752278 30886 307 2.602564 7.98987148 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 47 2.71e-4   NR KAG9392756.1 201153 g30683 i0 40.9 1.23127035830619 66 37 62.5 1 46 237 14 79 KAG9392756.1 Heat shock factor binding 1 [Carpediemonas membranifera] diamond 378 47 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29421046 29421046 PRJNA752278_P_NODE_69_length_2345_cov_12.948504_g57_i0 PRJNA752278 69 2345 12.948504 303.6424188 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.4 0.0126   NR GIQ80334.1 797122 g57 i0 27.3 0.26226012793177 205 129 23.9 7 1681 1121 719 921 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 615 52.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
29809880 29809880 PRJNA752278_P_NODE_2451_length_757_cov_8.960526_g2263_i0 PRJNA752278 2451 757 8.960526 67.83118182 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 226 1.71e-70   NR GIQ80663.1 797122 g2263 i0 52.9 1.73976221928666 221 101 86.4 2 46 699 5 225 GIQ80663.1 glycoside hydrolase, family 25 [Kipferlia bialata] diamond 1317 228 0.991228070175439 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30274277 30274277 PRJNA752278_P_NODE_64672_length_263_cov_1.894737_g64469_i0 PRJNA752278 64672 263 1.894737 4.98315831 Giardia muris 5742 Fornicata other_Eukaryota 44.7 0.00384   NR TNJ29172.1 5742 g64469 i0 39.2 1.81368821292776 74 39 83.3 4 251 33 19 87 TNJ29172.1 Fibroblast growth factor family protein [Giardia muris] diamond 477 44.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
32202529 32202529 PRJNA752278_P_NODE_15978_length_384_cov_2.530547_g15775_i0 PRJNA752278 15978 384 2.530547 9.71730048 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 96.3 3.4e-20   NR KAG9394989.1 201153 g15775 i0 45.3 0.828125 106 55 82.8 1 383 66 190 292 KAG9394989.1 RhoGEF domain [Carpediemonas membranifera] diamond 318 96.3 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;