RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA752278", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA752278 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28789553 28789553 PRJNA752278_P_NODE_27147_length_317_cov_2.471311_g26944_i0 PRJNA752278 27147 317 2.471311 7.83405587 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 83.6 9.13e-17   NR MCU0425458.1 2447898 g26944 i0 55.7 3.20820189274448 79 34 73.8 1 253 20 2 80 MCU0425458.1 SDR family oxidoreductase [Candidatus Kapaibacterium sp.] diamond 1017 83.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29452457 29452457 PRJNA752278_P_NODE_29830_length_310_cov_2.641350_g29627_i0 PRJNA752278 29830 310 2.64135 8.188185 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 100 4.4800000000000005e-22   NR MCU0425006.1 2447898 g29627 i0 75 0.658064516129032 68 16 64.8 1 309 109 447 514 MCU0425006.1 PAS domain-containing protein [Candidatus Kapaibacterium sp.] diamond 204 100 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30369255 30369255 PRJNA752278_P_NODE_58892_length_269_cov_1.209184_g58689_i0 PRJNA752278 58892 269 1.209184 3.25270496 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 115 1.4e-27   NR MCU0424709.1 2447898 g58689 i0 68.1 2.08550185873606 94 24 98.1 1 6 269 2102 2195 MCU0424709.1 IPT/TIG domain-containing protein [Candidatus Kapaibacterium sp.] diamond 561 115 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32802468 32802468 PRJNA752278_P_NODE_92720_length_245_cov_1.790698_g92517_i0 PRJNA752278 92720 245 1.790698 4.3872101 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 157 4.359999999999999e-47   NR MCU0424278.1 2447898 g92517 i0 95 1.95918367346939 80 4 98 0 6 245 40 119 MCU0424278.1 50S ribosomal protein L6 [Candidatus Kapaibacterium sp.] diamond 480 157 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;