RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA752278", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA752278 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26957752 26957752 PRJNA752278_P_NODE_90242_length_246_cov_1.716763_g90039_i0 PRJNA752278 90242 246 1.716763 4.22323698 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 76.3 4.28e-14   NR NUM56906.1 2030809 g90039 i0 59.6 3.20731707317073 57 23 69.5 0 234 64 171 227 NUM56906.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 789 76.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29231907 29231907 PRJNA752278_P_NODE_72569_length_255_cov_4.291209_g72366_i0 PRJNA752278 72569 255 4.291209 10.94258295 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 87.8 1.33e-18   NR HNY85826.1 2030809 g72366 i0 64.3 2.97647058823529 84 29 97.6 1 6 254 32 115 HNY85826.1 NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 759 87.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29610284 29610284 PRJNA752278_P_NODE_10230_length_451_cov_1.873016_g10027_i0 PRJNA752278 10230 451 1.873016 8.44730216 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 49.3 0.00167   NR NLV45806.1 2030809 g10027 i0 35.4 0.432372505543237 65 42 43.2 0 1 195 595 659 NLV45806.1 CHRD domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 195 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30157278 30157278 PRJNA752278_P_NODE_32352_length_301_cov_2.723684_g32149_i0 PRJNA752278 32352 301 2.723684 8.19828884 Pseudomonadati 3379134 Bacteria Bacteria 47.4 0.00173   NR HPO15378.1 2030809 g32149 i0 40.3 1.47508305647841 72 40 71.8 2 66 281 498 566 HPO15378.1 M14 family zinc carboxypeptidase [Candidatus Hydrogenedentota bacterium] diamond 444 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30779556 30779556 PRJNA752278_P_NODE_96354_length_244_cov_0.900585_g96151_i0 PRJNA752278 96354 244 0.900585 2.1974274 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 75.1 1.36e-13   NR MBI2432920.1 2030809 g96151 i0 83.3 1.54918032786885 42 7 51.6 0 126 1 1 42 MBI2432920.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Candidatus Hydrogenedentota bacterium] diamond 378 75.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32234459 32234459 PRJNA752278_P_NODE_71858_length_256_cov_2.136612_g71655_i0 PRJNA752278 71858 256 2.136612 5.46972672 Candidatus Abyssubacteria bacterium 2093359 Bacteria Bacteria 133 1.78e-36   NR NQU08247.1 2093359 g71655 i0 78.8 1.98046875 85 18 99.6 0 255 1 70 154 NQU08247.1 polyprenyl synthetase family protein [Candidatus Abyssubacteria bacterium] diamond 507 133 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Abyssobacteria       Candidatus Abyssubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;