RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA752278", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA752278 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24954164 24954164 PRJNA752278_P_NODE_50860_length_276_cov_2.019704_g50657_i0 PRJNA752278 50860 276 2.019704 5.57438304 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 322 1.75e-83   NTclustered gi|2621713090|emb|OY771587.1| 3060593 g50657 i0 87.681 277.757246376812 276 34 100 0 1 276 1457651 1457926 MAG: Candidatus Cloacimonadales bacterium isolate 1252d336-4e06-4a70-9fd9-88bc0735b540 genome assembly, chromosome: 1 blastn 76661 322 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
30052647 30052647 PRJNA752278_P_NODE_16411_length_381_cov_1.564935_g16208_i0 PRJNA752278 16411 381 1.564935 5.96240235 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 44.3 0.046   NR MFC1898309.1 2030808 g16208 i0 39.3 0.440944881889764 56 34 44.1 0 218 51 380 435 MFC1898309.1 Na/Pi cotransporter family protein [Candidatus Cloacimonadota bacterium] diamond 168 44.3 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31348517 31348517 PRJNA752278_P_NODE_45976_length_281_cov_1.379808_g45773_i0 PRJNA752278 45976 281 1.379808 3.87726048 Candidatus Cloacimonetes bacterium 4572_55 1971726 Bacteria Bacteria 45.4 0.00687   NR OQY28892.1 1971726 g45773 i0 33.8 3.75800711743772 80 47 85.4 3 2 241 1254 1327 OQY28892.1 MAG: hypothetical protein B6244_05660 [Candidatus Cloacimonetes bacterium 4572_55] diamond 1056 45.4 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium 4572_55

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;