RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA752278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA752278 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26641241 26641241 PRJNA752278_P_NODE_111201_length_208_cov_4.488889_g110998_i0 PRJNA752278 111201 208 4.488889 9.33688912 Minisyncoccota bacterium 2053589 Bacteria Bacteria 130 4.32e-33   NR MDD4804358.1 2053589 g110998 i0 92.8 0.995192307692308 69 5 99.5 0 208 2 712 780 MDD4804358.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 207 130 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27558154 27558154 PRJNA752278_P_NODE_66724_length_261_cov_2.053191_g66521_i0 PRJNA752278 66724 261 2.053191 5.35882851 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.7 2.45e-20   NR MFA5387827.1 2053589 g66521 i0 53.8 0.919540229885057 80 37 92 0 243 4 452 531 MFA5387827.1 DUF3987 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 240 94.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29989651 29989651 PRJNA752278_P_NODE_21031_length_349_cov_1.467391_g20828_i0 PRJNA752278 21031 349 1.467391 5.12119459 Minisyncoccota bacterium 2053589 Bacteria Bacteria 99.8 1.41e-24   NR MDD2657982.1 2053589 g20828 i0 55.8 1.36676217765043 77 34 66.2 0 256 26 16 92 MDD2657982.1 KTSC domain-containing protein [Candidatus Paceibacterota bacterium] diamond 477 99.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30147327 30147327 PRJNA752278_P_NODE_50372_length_277_cov_1.269608_g50169_i0 PRJNA752278 50372 277 1.269608 3.51681416 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.9 6.07e-16   NR HRH31009.1 2053589 g50169 i0 68.6 0.552346570397112 51 16 55.2 0 156 4 10 60 HRH31009.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 153 75.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;