RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA752278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA752278 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27968752 27968752 PRJNA752278_P_NODE_1105_length_1034_cov_2.144641_g949_i0 PRJNA752278 1105 1034 2.144641 22.17558794 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 180 1.55e-49   NR MBI4588610.1 2053607 g949 i0 34.9 0.864603481624758 298 149 74.9 3 1 774 90 382 MBI4588610.1 ketoacyl-ACP synthase III [Candidatus Rokuibacteriota bacterium] diamond 894 180 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28600415 28600415 PRJNA752278_P_NODE_48187_length_279_cov_1.305825_g47984_i0 PRJNA752278 48187 279 1.305825 3.64325175 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 137 8.239999999999999e-37   NR PYN20158.1 2053607 g47984 i0 84.8 2.96774193548387 92 14 98.9 0 277 2 52 143 PYN20158.1 MAG: branched-chain amino acid ABC transporter permease [Candidatus Rokuibacteriota bacterium] diamond 828 137 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28726625 28726625 PRJNA752278_P_NODE_91987_length_246_cov_0.890173_g91784_i0 PRJNA752278 91987 246 0.890173 2.18982558 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 55.8 7.93e-7   NR PYM14716.1 2053607 g91784 i0 55.3 5.17073170731707 47 21 57.3 0 243 103 154 200 PYM14716.1 MAG: hypothetical protein DMD81_17080 [Candidatus Rokuibacteriota bacterium] diamond 1272 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32487476 32487476 PRJNA752278_P_NODE_84419_length_248_cov_3.108571_g84216_i0 PRJNA752278 84419 248 3.108571 7.70925608 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 40.8 0.0394   NR MBI1894710.1 2053607 g84216 i0 35.2 0.858870967741935 71 42 85.9 1 214 2 4 70 MBI1894710.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 213 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;