RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA752278", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA752278 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24954992 24954992 PRJNA752278_P_NODE_93800_length_245_cov_0.895349_g93597_i0 PRJNA752278 93800 245 0.895349 2.19360505 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 58.4 4.75e-4   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g93597 i0 88 0.624489795918367 50 5 20 1 185 233 420473 420424 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 153 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
27505308 27505308 PRJNA752278_P_NODE_42743_length_284_cov_1.459716_g42540_i0 PRJNA752278 42743 284 1.459716 4.14559344 Bacteria 2 Bacteria Bacteria 153 8.69e-41   NR RKW20455.1 2044595 g42540 i0 95.4 1.83802816901408 87 4 91.9 0 23 283 201 287 RKW20455.1 MAG: hypothetical protein D8B45_07365 [Candidatus Altimarinota bacterium] diamond 522 153 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30031198 30031198 PRJNA752278_P_NODE_49851_length_277_cov_1.946078_g49648_i0 PRJNA752278 49851 277 1.946078 5.39063606 Bacteria 2 Bacteria Bacteria 58.5 3.68e-8   NR NJK47836.1 2044595 g49648 i0 58.5 2.43682310469314 41 17 44.4 0 125 3 12 52 NJK47836.1 TM2 domain-containing protein [Candidatus Altimarinota bacterium] diamond 675 58.9 0.99320882852292 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;