contig_metadata
20 rows where bioproject = "PRJNA751877" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9655141 | 9655141 | PRJNA751877_P_NODE_9788_length_350_cov_1.111913_g9666_i0 | PRJNA751877 | 9788 | 350 | 1.111913 | 3.8916955 | Limisphaera ngatamarikiensis | 1324935 | Bacteria | Bacteria | 57 | 1.3e-6 | NR | WP_165107131.1 | 1324935 | g9666 | i0 | 38.6 | 0.711428571428571 | 83 | 51 | 71.1 | 0 | 22 | 270 | 535 | 617 | WP_165107131.1 tetratricopeptide repeat protein [Limisphaera ngatamarikiensis] | diamond | 249 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaeraceae | Limisphaera | Limisphaera ngatamarikiensis | |
| 12205885 | 12205885 | PRJNA751877_P_NODE_25650_length_247_cov_0.885057_g25528_i0 | PRJNA751877 | 25650 | 247 | 0.885057 | 2.18609079 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 150 | 7.7e-32 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g25528 | i0 | 94.792 | 40.6153846153846 | 96 | 5 | 39 | 0 | 127 | 222 | 751037 | 750942 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 10032 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 12679944 | 12679944 | PRJNA751877_P_NODE_27650_length_244_cov_0.900585_g27528_i0 | PRJNA751877 | 27650 | 244 | 0.900585 | 2.1974274 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 151 | 1.8799999999999993e-40 | NR | WP_170266723.1 | 748831 | g27528 | i0 | 93.8 | 0.983606557377049 | 80 | 5 | 98.4 | 0 | 242 | 3 | 96 | 175 | WP_170266723.1 phosphoenolpyruvate carboxylase [Brevifollis gellanilyticus] | diamond | 240 | 151 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 17304496 | 17304496 | PRJNA751877_P_NODE_24874_length_248_cov_0.880000_g24752_i0 | PRJNA751877 | 24874 | 248 | 0.88 | 2.1824 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 89 | 1.41e-18 | NR | WP_146852628.1 | 748831 | g24752 | i0 | 91.7 | 0.580645161290323 | 48 | 4 | 58.1 | 0 | 104 | 247 | 1 | 48 | WP_146852628.1 thymidine phosphorylase [Brevifollis gellanilyticus] | diamond | 144 | 89 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 19051813 | 19051813 | PRJNA751877_P_NODE_155_length_1627_cov_3.868726_g97_i0 | PRJNA751877 | 155 | 1627 | 3.868726 | 62.94417202 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 844 | 3.38e-305 | NR | MDR3405335.1 | 2510640 | g97 | i0 | 88.6 | 0.855562384757222 | 464 | 53 | 85.6 | 0 | 36 | 1427 | 1 | 464 | MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.] | diamond | 1392 | 844 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 26863283 | 26863283 | PRJNA751877_P_NODE_25561_length_247_cov_0.885057_g25439_i0 | PRJNA751877 | 25561 | 247 | 0.885057 | 2.18609079 | Roseimicrobium sp. | 3069589 | Bacteria | Bacteria | 103 | 1.16e-23 | NR | HSH93947.1 | 3069589 | g25439 | i0 | 62.8 | 0.947368421052632 | 78 | 29 | 94.7 | 0 | 246 | 13 | 133 | 210 | HSH93947.1 hypothetical protein [Roseimicrobium sp.] | diamond | 234 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. | |
| 26926216 | 26926216 | PRJNA751877_P_NODE_24382_length_249_cov_0.875000_g24260_i0 | PRJNA751877 | 24382 | 249 | 0.875 | 2.17875 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 152 | 1.2e-40 | NR | WP_170267079.1 | 748831 | g24260 | i0 | 92.8 | 1.98795180722892 | 83 | 6 | 100 | 0 | 1 | 249 | 1536 | 1618 | WP_170267079.1 lamin tail domain-containing protein [Brevifollis gellanilyticus] | diamond | 495 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 27495211 | 27495211 | PRJNA751877_P_NODE_25543_length_247_cov_0.885057_g25421_i0 | PRJNA751877 | 25543 | 247 | 0.885057 | 2.18609079 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 162 | 1.0499999999999999e-47 | NR | WP_146849155.1 | 748831 | g25421 | i0 | 96.3 | 0.983805668016194 | 81 | 3 | 98.4 | 0 | 245 | 3 | 159 | 239 | WP_146849155.1 ABC transporter ATP-binding protein [Brevifollis gellanilyticus] | diamond | 243 | 162 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 27558105 | 27558105 | PRJNA751877_P_NODE_29324_length_242_cov_0.911243_g29202_i0 | PRJNA751877 | 29324 | 242 | 0.911243 | 2.20520806 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 92 | 2.61e-20 | NR | WP_397382604.1 | 1965333 | g29202 | i0 | 94.9 | 0.483471074380165 | 39 | 2 | 48.3 | 0 | 242 | 126 | 249 | 287 | WP_397382604.1 sugar phosphate isomerase/epimerase family protein [Prosthecobacter sp.] | diamond | 117 | 92 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 28221194 | 28221194 | PRJNA751877_P_NODE_23046_length_250_cov_0.870056_g22924_i0 | PRJNA751877 | 23046 | 250 | 0.870056 | 2.17514 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 120 | 2.13e-30 | NR | WP_198141320.1 | 2736 | g22924 | i0 | 63.5 | 4.02 | 85 | 29 | 99.6 | 1 | 1 | 249 | 99 | 183 | WP_198141320.1 polysaccharide pyruvyl transferase family protein [Verrucomicrobium spinosum] | diamond | 1005 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 28862656 | 28862656 | PRJNA751877_P_NODE_20628_length_261_cov_1.611702_g20506_i0 | PRJNA751877 | 20628 | 261 | 1.611702 | 4.20654222 | Bacteria | 2 | Bacteria | Bacteria | 66.6 | 1.82e-10 | NR | HEY1793481.1 | 2006848 | g20506 | i0 | 97 | 9.62068965517241 | 33 | 1 | 37.9 | 0 | 99 | 1 | 1 | 33 | HEY1793481.1 GMC family oxidoreductase [Opitutaceae bacterium] | diamond | 2511 | 66.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 29083915 | 29083915 | PRJNA751877_P_NODE_19708_length_267_cov_1.335052_g19586_i0 | PRJNA751877 | 19708 | 267 | 1.335052 | 3.56458884 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 82.8 | 4.29e-16 | NR | HXC34131.1 | 2499141 | g19586 | i0 | 48.8 | 2.8876404494382 | 84 | 41 | 94.4 | 2 | 267 | 16 | 503 | 584 | HXC34131.1 SDR family NAD(P)-dependent oxidoreductase [Verrucomicrobiia bacterium] | diamond | 771 | 83.6 | 0.990430622009569 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29799966 | 29799966 | PRJNA751877_P_NODE_14191_length_305_cov_2.000000_g14069_i0 | PRJNA751877 | 14191 | 305 | 2 | 6.1 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 60.1 | 2.74e-8 | NR | HEX3818319.1 | 2201154 | g14069 | i0 | 36 | 1.85901639344262 | 100 | 56 | 96.4 | 4 | 3 | 296 | 125 | 218 | HEX3818319.1 CAP domain-containing protein [Chthoniobacterales bacterium] | diamond | 567 | 60.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 29957943 | 29957943 | PRJNA751877_P_NODE_11911_length_327_cov_1.212598_g11789_i0 | PRJNA751877 | 11911 | 327 | 1.212598 | 3.96519546 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 64.3 | 2.51e-9 | NR | MDA7675033.1 | 2562705 | g11789 | i0 | 34.8 | 4.55045871559633 | 89 | 58 | 81.7 | 0 | 325 | 59 | 150 | 238 | MDA7675033.1 hypothetical protein [Akkermansiaceae bacterium] | diamond | 1488 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 30306019 | 30306019 | PRJNA751877_P_NODE_24932_length_248_cov_0.880000_g24810_i0 | PRJNA751877 | 24932 | 248 | 0.88 | 2.1824 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 110 | 9.24e-29 | NR | MCB1212107.1 | 2026801 | g24810 | i0 | 71.8 | 1.63306451612903 | 71 | 20 | 85.9 | 0 | 213 | 1 | 1 | 71 | MCB1212107.1 sulfatase-like hydrolase/transferase [Verrucomicrobiales bacterium] | diamond | 405 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30747913 | 30747913 | PRJNA751877_P_NODE_23734_length_249_cov_1.539773_g23612_i0 | PRJNA751877 | 23734 | 249 | 1.539773 | 3.83403477 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 154 | 1.1499999999999999e-42 | NR | MCX6853541.1 | 2026799 | g23612 | i0 | 94 | 3.95180722891566 | 83 | 5 | 100 | 0 | 1 | 249 | 222 | 304 | MCX6853541.1 tetratricopeptide repeat protein [Verrucomicrobiota bacterium] | diamond | 984 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30906004 | 30906004 | PRJNA751877_P_NODE_23834_length_249_cov_0.875000_g23712_i0 | PRJNA751877 | 23834 | 249 | 0.875 | 2.17875 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 50.4 | 7.62e-5 | NR | MFM2143340.1 | 2026799 | g23712 | i0 | 63.4 | 1.36144578313253 | 41 | 14 | 49.4 | 1 | 126 | 248 | 135 | 174 | MFM2143340.1 aspartate--tRNA ligase [Verrucomicrobiota bacterium] | diamond | 339 | 50.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31727797 | 31727797 | PRJNA751877_P_NODE_29977_length_241_cov_0.916667_g29855_i0 | PRJNA751877 | 29977 | 241 | 0.916667 | 2.20916747 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 157 | 2.57e-44 | NR | WP_146851029.1 | 748831 | g29855 | i0 | 92.4 | 0.983402489626556 | 79 | 6 | 98.3 | 0 | 239 | 3 | 244 | 322 | WP_146851029.1 hypothetical protein [Brevifollis gellanilyticus] | diamond | 237 | 157 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 32171067 | 32171067 | PRJNA751877_P_NODE_23998_length_249_cov_0.875000_g23876_i0 | PRJNA751877 | 23998 | 249 | 0.875 | 2.17875 | Brevifollis gellanilyticus | 748831 | Bacteria | Bacteria | 164 | 2.29e-46 | NR | WP_146855482.1 | 748831 | g23876 | i0 | 95.1 | 3.95180722891566 | 82 | 4 | 98.8 | 0 | 2 | 247 | 294 | 375 | WP_146855482.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Brevifollis gellanilyticus] | diamond | 984 | 164 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Brevifollis | Brevifollis gellanilyticus | |
| 32202503 | 32202503 | PRJNA751877_P_NODE_16878_length_285_cov_1.089623_g16756_i0 | PRJNA751877 | 16878 | 285 | 1.089623 | 3.10542555 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 101 | 1.7000000000000002e-22 | NR | MBL9116487.1 | 2026800 | g16756 | i0 | 55.9 | 0.978947368421053 | 93 | 37 | 96.8 | 2 | 9 | 284 | 324 | 413 | MBL9116487.1 DUF11 domain-containing protein [Verrucomicrobiaceae bacterium] | diamond | 279 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;