RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA751877" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA751877 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27747962 27747962 PRJNA751877_P_NODE_26504_length_246_cov_0.890173_g26382_i0 PRJNA751877 26504 246 0.890173 2.18982558 Adineta steineri 433720 Rotifera other_Eukaryota 50.1 1.04e-4   NR CAF1411793.1 433720 g26382 i0 34.2 0.890243902439024 73 48 89 0 1 219 600 672 CAF1411793.1 unnamed protein product [Adineta steineri] diamond 219 50.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28189556 28189556 PRJNA751877_P_NODE_6826_length_393_cov_1.237500_g6704_i0 PRJNA751877 6826 393 1.2375 4.863375 Adineta steineri 433720 Rotifera other_Eukaryota 43.5 0.0426   NR CAF1540500.1 433720 g6704 i0 46.2 0.297709923664122 39 21 29.8 0 167 283 95 133 CAF1540500.1 unnamed protein product [Adineta steineri] diamond 117 43.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31032494 31032494 PRJNA751877_P_NODE_1835_length_603_cov_1.647170_g1714_i0 PRJNA751877 1835 603 1.64717 9.9324351 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 108 8.410000000000001e-27   NR CAF3440507.1 2762512 g1714 i0 84.4 0.318407960199005 64 10 31.8 0 1 192 5 68 CAF3440507.1 unnamed protein product [Rotaria sp. Silwood2] diamond 192 108 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
31284992 31284992 PRJNA751877_P_NODE_15555_length_293_cov_1.400000_g15433_i0 PRJNA751877 15555 293 1.4 4.102 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 64.3 1.1e-9   NR CAF4700624.1 2762512 g15433 i0 42.7 2.94880546075085 96 48 91.1 2 22 288 184 279 CAF4700624.1 unnamed protein product, partial [Rotaria sp. Silwood2] diamond 864 64.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;