RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA751877" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA751877 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28600375 28600375 PRJNA751877_P_NODE_23567_length_250_cov_0.870056_g23445_i0 PRJNA751877 23567 250 0.870056 2.17514 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 50.1 1.07e-4   NR MDO9332954.1 2026733 g23445 i0 36.8 0.816 68 41 81.6 1 46 249 405 470 MDO9332954.1 hypothetical protein [Dehalococcoidales bacterium] diamond 204 50.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
28820964 28820964 PRJNA751877_P_NODE_14268_length_305_cov_0.995690_g14146_i0 PRJNA751877 14268 305 0.99569 3.0368545 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 45.1 0.0124   NR MFA5379264.1 2026734 g14146 i0 30.5 3.55081967213115 105 48 90.5 3 13 288 1728 1820 MFA5379264.1 PKD domain-containing protein [Dehalococcoidia bacterium] diamond 1083 45.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29989633 29989633 PRJNA751877_P_NODE_26591_length_246_cov_0.890173_g26469_i0 PRJNA751877 26591 246 0.890173 2.18982558 Bellilinea sp. 2838785 Bacteria Bacteria 108 7.36e-26   NR HMN14775.1 2838785 g26469 i0 84.7 0.719512195121951 59 9 72 0 70 246 278 336 HMN14775.1 IS256 family transposase [Bellilinea sp.] diamond 177 108 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Bellilinea Bellilinea sp.
30147292 30147292 PRJNA751877_P_NODE_26972_length_245_cov_0.895349_g26850_i0 PRJNA751877 26972 245 0.895349 2.19360505 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 49.3 1.85e-4   NR MDO9332954.1 2026733 g26850 i0 32.5 0.979591836734694 80 52 98 1 1 240 405 482 MDO9332954.1 hypothetical protein [Dehalococcoidales bacterium] diamond 240 49.3 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
30210540 30210540 PRJNA751877_P_NODE_5152_length_431_cov_1.656425_g5030_i0 PRJNA751877 5152 431 1.656425 7.13919175 Anaerolineae bacterium 2052143 Bacteria Bacteria 87 6.84e-19   NR MCW5848612.1 2052143 g5030 i0 43.2 0.918793503480278 132 66 91.2 4 406 14 1 124 MCW5848612.1 profilin [Anaerolineae bacterium] diamond 396 87 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31189850 31189850 PRJNA751877_P_NODE_28475_length_243_cov_0.905882_g28353_i0 PRJNA751877 28475 243 0.905882 2.20129326 Chloroflexota bacterium 2026724 Bacteria Bacteria 99 2.26e-22   NR MEP7286046.1 2026724 g28353 i0 62.5 4.8641975308642 80 30 98.8 0 241 2 140 219 MEP7286046.1 5-(carboxyamino)imidazole ribonucleotide synthase [Chloroflexota bacterium] diamond 1182 99 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;