RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA751877" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA751877 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8379690 8379690 PRJNA751877_P_NODE_24387_length_249_cov_0.875000_g24265_i0 PRJNA751877 24387 249 0.875 2.17875 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 125 1.04e-31   NR HVK06442.1 2933160 g24265 i0 71.3 1.92771084337349 80 23 96.4 0 4 243 61 140 HVK06442.1 rhamnulokinase family protein [Armatimonadaceae bacterium] diamond 480 125 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
27684913 27684913 PRJNA751877_P_NODE_17664_length_280_cov_1.309179_g17542_i0 PRJNA751877 17664 280 1.309179 3.6657012 Armatimonadota bacterium 2033014 Bacteria Bacteria 72.4 2.09e-12   NR MBM3460520.1 2033014 g17542 i0 46.2 0.975 91 42 97.5 2 7 279 296 379 MBM3460520.1 hypothetical protein [Armatimonadota bacterium] diamond 273 72.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32739653 32739653 PRJNA751877_P_NODE_29040_length_242_cov_0.911243_g28918_i0 PRJNA751877 29040 242 0.911243 2.20520806 Armatimonadota bacterium 2033014 Bacteria Bacteria 44.3 0.0102   NR MBV9849037.1 2033014 g28918 i0 37.9 0.71900826446281 58 34 71.9 1 12 185 2 57 MBV9849037.1 hypothetical protein [Armatimonadota bacterium] diamond 174 44.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;