RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA751877", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA751877 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27599987 27599987 PRJNA751877_P_NODE_15104_length_297_cov_1.375000_g14982_i0 PRJNA751877 15104 297 1.375 4.08375 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 170 2.39e-49   NR XP_013232628.1 5802 g14982 i0 81.6 40.5656565656566 98 18 99 0 295 2 3 100 XP_013232628.1 60S ribosomal protein L3, putative [Eimeria tenella] diamond 12048 171 0.994152046783626 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
27905366 27905366 PRJNA751877_P_NODE_9985_length_347_cov_3.178832_g9863_i0 PRJNA751877 9985 347 3.178832 11.03054704 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.02e-12   NR XP_012649794.1 1133968 g9863 i0 55.6 1.43515850144092 54 24 46.7 0 327 166 14 67 XP_012649794.1 large subunit ribosomal protein LP1 [Babesia microti strain RI] diamond 498 70.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;