RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA751877", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA751877 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13480055 13480055 PRJNA751877_P_NODE_16971_length_284_cov_1.459716_g16849_i0 PRJNA751877 16971 284 1.459716 4.14559344 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 196 1.14e-45   NTclustered gi|2037925142|ref|XM_041619650.1| 7654 g16849 i0 81.301 50.6584507042254 246 43 87 1 36 281 388 630 PREDICTED: Lytechinus variegatus ras-related protein Rab-5B-like (LOC121424059), transcript variant X2, mRNA blastn 14387 196 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
27621603 27621603 PRJNA751877_P_NODE_26624_length_246_cov_0.890173_g26502_i0 PRJNA751877 26624 246 0.890173 2.18982558 Diadema antillarum 105358 Echinodermata other_Eukaryota 48.5 3.3e-4   NR XP_071489045.1 105358 g26502 i0 65.9 0.98780487804878 41 14 50 0 1 123 242 282 XP_071489045.1 large ribosomal subunit protein uL18-like [Diadema antillarum] diamond 243 48.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29294857 29294857 PRJNA751877_P_NODE_21249_length_257_cov_1.434783_g21127_i0 PRJNA751877 21249 257 1.434783 3.68739231 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 55.5 8e-7   NR XP_041477157.1 7654 g21127 i0 44.8 0.67704280155642 58 32 67.7 0 233 60 11 68 XP_041477157.1 agrin-like [Lytechinus variegatus] diamond 174 55.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31611425 31611425 PRJNA751877_P_NODE_27976_length_244_cov_0.900585_g27854_i0 PRJNA751877 27976 244 0.900585 2.1974274 Metazoa 33208 Echinodermata other_Eukaryota 119 5.77e-30   NR XP_033641721.1 7604 g27854 i0 72.2 11.7909836065574 79 20 97.1 1 243 7 79 155 XP_033641721.1 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase-like [Asterias rubens] diamond 2877 119 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;