RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA751877", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA751877 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28316146 28316146 PRJNA751877_P_NODE_28846_length_243_cov_0.905882_g28724_i0 PRJNA751877 28846 243 0.905882 2.20129326 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 69.7 1.25e-11   NR XP_005775653.1 280463 g28724 i0 50.6 1 81 37 96.3 2 243 10 2326 2406 XP_005775653.1 polyketide synthase [Emiliania huxleyi CCMP1516] diamond 243 69.7 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
32244415 32244415 PRJNA751877_P_NODE_12998_length_317_cov_1.090164_g12876_i0 PRJNA751877 12998 317 1.090164 3.45581988 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 8.639999999999998e-32   NR KAL1530215.1 97485 g12876 i0 56.1 3.02839116719243 107 44 98.4 2 313 2 14 120 KAL1530215.1 hypothetical protein AB1Y20_001130 [Prymnesium parvum] diamond 960 125 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;