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contig_metadata

28 rows where bioproject = "PRJNA751877" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA751877 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
726558 726558 PRJNA751877_P_NODE_5281_length_427_cov_1.644068_g5159_i0 PRJNA751877 5281 427 1.644068 7.02017036 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 107 2.5100000000000004e-27   NR KYQ93417.1 361077 g5159 i0 68.4 1.04683840749415 76 24 53.4 0 408 181 1 76 KYQ93417.1 40S ribosomal protein S21 [Tieghemostelium lacteum] diamond 447 107 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
6304121 6304121 PRJNA751877_P_NODE_15625_length_293_cov_1.018182_g15503_i0 PRJNA751877 15625 293 1.018182 2.98327326 Acanthamoeba 5754 Discosea other_Eukaryota 542 1.32e-149   NTclustered gi|2979652|gb|AF019052.1|AF019052 5757 g15503 i0 100 100.662116040956 293 0 100 0 1 293 719 1011 Acanthamoeba polyphaga Panola Mountain 18S ribosomal RNA gene, partial sequence blastn 29494 542 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
7104974 7104974 PRJNA751877_P_NODE_1886_length_598_cov_1.045714_g1765_i0 PRJNA751877 1886 598 1.045714 6.25336972 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 308 2.3499999999999995e-96   NR XP_004337289.1 1257118 g1765 i0 75.4 0.998327759197324 199 49 99.8 0 597 1 116 314 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 597 308 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8379466 8379466 PRJNA751877_P_NODE_13227_length_314_cov_1.917012_g13105_i0 PRJNA751877 13227 314 1.917012 6.01941768 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 3.54e-51   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g13105 i0 84.545 30.4745222929936 220 30 69 4 1 218 85 302 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 9569 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13480113 13480113 PRJNA751877_P_NODE_19471_length_269_cov_0.867347_g19349_i0 PRJNA751877 19471 269 0.867347 2.33316343 Dictyostelium discoideum 44689 Evosea other_Eukaryota 91.7 1.09e-19   NR CAA26255.1 44689 g19349 i0 50 4.47211895910781 80 39 89.2 1 13 252 128 206 CAA26255.1 cysteine proteinase I precursor [Dictyostelium discoideum] diamond 1203 91.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13480429 13480429 PRJNA751877_P_NODE_6371_length_402_cov_1.401216_g6249_i0 PRJNA751877 6371 402 1.401216 5.63288832 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 551 3.119999999999999e-152   NTclustered gi|300078498|gb|GU001160.1| 5755 g6249 i0 92.138 15.547263681592 407 7 97 15 1 388 5911 5511 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6250 551 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14755435 14755435 PRJNA751877_P_NODE_5272_length_428_cov_1.042254_g5150_i0 PRJNA751877 5272 428 1.042254 4.46084712 Dictyostelium purpureum 5786 Evosea other_Eukaryota 259 2.27e-64   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g5150 i0 78.436 7.49766355140187 422 73 96 14 14 426 508 96 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 3209 259 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17304204 17304204 PRJNA751877_P_NODE_1134_length_712_cov_1.136150_g1017_i0 PRJNA751877 1134 712 1.13615 8.089388 Acramoeba dendroida 633159 Evosea other_Eukaryota 494 9.84e-135   NTclustered gi|146448853|gb|EF513194.1| 633159 g1017 i0 79.383 79.6039325842697 713 137 99 9 5 712 711 4 Acramoeba dendroida elongation factor 1A (EF1A) gene, partial cds blastn 56678 494 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Acramoebidae Acramoeba Acramoeba dendroida
21129216 21129216 PRJNA751877_P_NODE_9737_length_350_cov_1.667870_g9615_i0 PRJNA751877 9737 350 1.66787 5.837545 Nebela penardiana 499102 Tubulinea other_Eukaryota 171 4.69e-52   NR AFX73073.1 499102 g9615 i0 74.8 2.95714285714286 115 29 98.6 0 2 346 14 128 AFX73073.1 14-3-3 protein, partial [Nebela penardiana] diamond 1035 171 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Hyalospheniidae Nebela Nebela penardiana
22877690 22877690 PRJNA751877_P_NODE_19098_length_271_cov_1.166667_g18976_i0 PRJNA751877 19098 271 1.166667 3.16166757 Acanthamoeba 5754 Discosea other_Eukaryota 501 2.05e-137   NTclustered gi|2756360496|gb|PQ002562.1| 5756 g18976 i0 100 99.9446494464945 271 0 100 0 1 271 606 876 Acanthamoeba sp. isolate PHAS18-2 small subunit ribosomal RNA gene, partial sequence blastn 27085 501 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
26641232 26641232 PRJNA751877_P_NODE_7781_length_377_cov_1.013158_g7659_i0 PRJNA751877 7781 377 1.013158 3.81960566 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 101 7.079999999999999e-24   NR PRP80577.1 1890364 g7659 i0 62.6 0.724137931034483 91 33 71.6 1 317 48 125 215 PRP80577.1 hypothetical protein PROFUN_12339 [Planoprotostelium fungivorum] diamond 273 101 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26735843 26735843 PRJNA751877_P_NODE_13681_length_310_cov_1.299578_g13559_i0 PRJNA751877 13681 310 1.299578 4.0286918 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.8 3.04e-24   NR XP_004347153.1 1257118 g13559 i0 49.5 0.996774193548387 103 51 99.7 1 1 309 36 137 XP_004347153.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 309 99.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26957681 26957681 PRJNA751877_P_NODE_29822_length_241_cov_0.916667_g29700_i0 PRJNA751877 29822 241 0.916667 2.20916747 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 112 3.25e-27   NR PRP81576.1 1890364 g29700 i0 73.3 1.87966804979253 75 20 93.4 0 240 16 86 160 PRP81576.1 hypothetical protein PROFUN_01083 [Planoprotostelium fungivorum] diamond 453 112 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27442266 27442266 PRJNA751877_P_NODE_20683_length_261_cov_1.228723_g20561_i0 PRJNA751877 20683 261 1.228723 3.20696703 root 1 Root_unresolved Root_unresolved 78.6 7.08e-16   NR XP_004352755.1 1257118 g20561 i0 57.9 5.71264367816092 76 29 85.1 2 259 38 106 180 XP_004352755.1 peptidylprolyl cis-trans isomerase, FKBP-type domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1491 78.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27947181 27947181 PRJNA751877_P_NODE_20885_length_259_cov_2.069892_g20763_i0 PRJNA751877 20885 259 2.069892 5.36102028 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 1.88e-13   NR XP_003283857.1 5786 g20763 i0 46.3 10.0888030888031 80 33 92.7 1 242 3 10 79 XP_003283857.1 40S ribosomal protein S20 [Dictyostelium purpureum] diamond 2613 70.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28389112 28389112 PRJNA751877_P_NODE_22466_length_251_cov_0.865169_g22344_i0 PRJNA751877 22466 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 159 7.94e-45   NR XP_004366862.1 261658 g22344 i0 84.3 41.0677290836653 83 13 99.2 0 251 3 243 325 XP_004366862.1 phenylalanine 4-monooxygenase [Cavenderia fasciculata] diamond 10308 160 0.99375 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28820967 28820967 PRJNA751877_P_NODE_22368_length_251_cov_0.865169_g22246_i0 PRJNA751877 22368 251 0.865169 2.17157419 Dictyostelium purpureum 5786 Evosea other_Eukaryota 102 2.99e-23   NR XP_003288217.1 5786 g22246 i0 56.6 0.99203187250996006 83 35 99.2 1 3 251 8 89 XP_003288217.1 uncharacterized protein DICPUDRAFT_152431 [Dictyostelium purpureum] diamond 249 102 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28884342 28884342 PRJNA751877_P_NODE_23508_length_250_cov_0.870056_g23386_i0 PRJNA751877 23508 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 7.93e-13   NR XP_004341132.1 1257118 g23386 i0 40 0.9 75 45 90 0 236 12 28 102 XP_004341132.1 AP3 complex beta3B subunit [Acanthamoeba castellanii str. Neff] diamond 225 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29462379 29462379 PRJNA751877_P_NODE_27470_length_244_cov_1.619883_g27348_i0 PRJNA751877 27470 244 1.619883 3.95251452 Dictyosteliales 2058949 Evosea other_Eukaryota 57 2.54e-7   NR KAF2078363.1 133409 g27348 i0 46.4 1.70901639344262 69 37 84.8 0 3 209 30 98 KAF2078363.1 hypothetical protein CYY_000347 [Polysphondylium violaceum] diamond 417 57 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30526654 30526654 PRJNA751877_P_NODE_24093_length_249_cov_0.875000_g23971_i0 PRJNA751877 24093 249 0.875 2.17875 Polysphondylium violaceum 133409 Evosea other_Eukaryota 57.4 2.71e-7   NR KAF2072033.1 133409 g23971 i0 34.6 0.975903614457831 81 49 95.2 2 11 247 362 440 KAF2072033.1 hypothetical protein CYY_006644 [Polysphondylium violaceum] diamond 243 57.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30536643 30536643 PRJNA751877_P_NODE_11553_length_331_cov_0.914729_g11431_i0 PRJNA751877 11553 331 0.914729 3.02775299 root 1 Root_unresolved Root_unresolved 97.8 4.78e-21   NR XP_004339738.1 1257118 g11431 i0 48 3.47129909365559 98 47 88.8 1 37 330 346 439 XP_004339738.1 ammonium transporter, putative [Acanthamoeba castellanii str. Neff] diamond 1149 98.6 0.991886409736308 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30589801 30589801 PRJNA751877_P_NODE_18473_length_275_cov_1.346535_g18351_i0 PRJNA751877 18473 275 1.346535 3.70297125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 1.63e-28   NR XP_004341947.1 1257118 g18351 i0 63.7 0.992727272727273 91 32 99.3 1 274 2 565 654 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 273 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30969200 30969200 PRJNA751877_P_NODE_17074_length_284_cov_0.914692_g16952_i0 PRJNA751877 17074 284 0.914692 2.59772528 Entamoeba histolytica 5759 Evosea other_Eukaryota 116 8.78e-31   NR AAC31935.1 5759 g16952 i0 61.7 1.98591549295775 94 34 99.3 2 284 3 19 110 AAC31935.1 Rho GDP exchange inhibitor, partial [Entamoeba histolytica] diamond 564 116 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
31380105 31380105 PRJNA751877_P_NODE_15756_length_291_cov_2.018349_g15634_i0 PRJNA751877 15756 291 2.018349 5.87339559 Heterostelium album PN5 2086695 Evosea other_Eukaryota 92.8 4.66e-20   NR XP_020436051.1 670386 g15634 i0 65.4 1.60824742268041 78 24 77.3 1 258 34 180 257 XP_020436051.1 actin bundling protein [Heterostelium album PN500] diamond 468 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
31380108 31380108 PRJNA751877_P_NODE_22736_length_251_cov_0.865169_g22614_i0 PRJNA751877 22736 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 112 2.04e-30   NR PRP89405.1 1890364 g22614 i0 68.9 0.884462151394422 74 23 88.4 0 243 22 18 91 PRP89405.1 40S ribosomal protein S21 [Planoprotostelium fungivorum] diamond 222 112 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32012648 32012648 PRJNA751877_P_NODE_16958_length_284_cov_1.459716_g16836_i0 PRJNA751877 16958 284 1.459716 4.14559344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.6 7.54e-7   NR XP_004337645.1 1257118 g16836 i0 36.4 1.64788732394366 77 49 81.3 0 36 266 14 90 XP_004337645.1 PB1 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 468 56.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32107507 32107507 PRJNA751877_P_NODE_11918_length_327_cov_1.212598_g11796_i0 PRJNA751877 11918 327 1.212598 3.96519546 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 123 7.389999999999999e-32   NR KAH3732769.1 1580589 g11796 i0 57.3 1.00917431192661 110 37 99.1 2 327 4 59 160 KAH3732769.1 actin bundling protein [Pelomyxa schiedti] diamond 330 123 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32297783 32297783 PRJNA751877_P_NODE_4939_length_437_cov_1.780220_g4817_i0 PRJNA751877 4939 437 1.78022 7.7795614 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 152 1.5699999999999996e-43   NR PRP86688.1 1890364 g4817 i0 62.8 0.8306636155606412 121 45 83.1 0 435 73 86 206 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 363 152 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;