contig_metadata
87 rows where bioproject = "PRJNA749559" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1199839 | 1199839 | PRJNA749559_P_NODE_4241_length_208_cov_0.870748_g4171_i0 | PRJNA749559 | 4241 | 208 | 0.870748 | 1.81115584 | Escherichia | 561 | Bacteria | Bacteria | 379 | 7.359999999999998e-101 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4171 | i0 | 99.519 | 377.014423076923 | 208 | 1 | 100 | 0 | 1 | 208 | 183300 | 183507 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 78419 | 379 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1199840 | 1199840 | PRJNA749559_P_NODE_4501_length_206_cov_0.882759_g4431_i0 | PRJNA749559 | 4501 | 206 | 0.882759 | 1.81848354 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4431 | i0 | 100 | 100 | 206 | 0 | 100 | 0 | 1 | 206 | 398505 | 398710 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20600 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1199841 | 1199841 | PRJNA749559_P_NODE_4841_length_203_cov_0.901408_g4771_i0 | PRJNA749559 | 4841 | 203 | 0.901408 | 1.82985824 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4771 | i0 | 100 | 100 | 203 | 0 | 100 | 0 | 1 | 203 | 4269162 | 4269364 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20300 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 2002031 | 2002031 | PRJNA749559_P_NODE_4722_length_204_cov_0.895105_g4652_i0 | PRJNA749559 | 4722 | 204 | 0.895105 | 1.8260142 | Rhizobium sp. SL42 | 2806346 | Bacteria | Bacteria | 250 | 5.88e-62 | NTclustered | gi|2185972064|gb|CP063397.1| | 2806346 | g4652 | i0 | 89.055 | 98.3872549019608 | 201 | 22 | 99 | 0 | 1 | 201 | 3402573 | 3402373 | Rhizobium sp. SL42 chromosome, complete genome | blastn | 20071 | 250 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium sp. SL42 | ||
| 2475218 | 2475218 | PRJNA749559_P_NODE_4682_length_204_cov_0.895105_g4612_i0 | PRJNA749559 | 4682 | 204 | 0.895105 | 1.8260142 | Rhizobiaceae | 82115 | Bacteria | Bacteria | 327 | 2.64e-85 | NTclustered | gi|404452221|gb|JF809815.1| | 430451 | g4612 | i0 | 95.588 | 4.95098039215686 | 204 | 9 | 100 | 0 | 1 | 204 | 85196 | 85399 | Sinorhizobium sp. M14 plasmid pSinA, complete sequence | blastn | 1010 | 329 | 0.993920972644377 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Sinorhizobium | Sinorhizobium sp. M14 | ||
| 3277314 | 3277314 | PRJNA749559_P_NODE_4183_length_209_cov_0.864865_g4113_i0 | PRJNA749559 | 4183 | 209 | 0.864865 | 1.80756785 | Acidovorax sp. 1608163 | 2478662 | Bacteria | Bacteria | 189 | 1.3399999999999996e-43 | NTclustered | gi|1494350456|gb|CP033069.1| | 2478662 | g4113 | i0 | 83.256 | 18.7799043062201 | 215 | 27 | 100 | 5 | 1 | 209 | 3389018 | 3388807 | Acidovorax sp. 1608163 chromosome, complete genome | blastn | 3925 | 189 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax sp. 1608163 | ||
| 3277315 | 3277315 | PRJNA749559_P_NODE_4243_length_208_cov_0.870748_g4173_i0 | PRJNA749559 | 4243 | 208 | 0.870748 | 1.81115584 | uncultured Brevundimonas sp. | 213418 | Bacteria | Bacteria | 119 | 2.24e-29 | NR | WP_295705670.1 | 213418 | g4173 | i0 | 92.6 | 0.980769230769231 | 68 | 5 | 98.1 | 0 | 3 | 206 | 564 | 631 | WP_295705670.1 4-alpha-glucanotransferase [uncultured Brevundimonas sp.] | diamond | 204 | 119 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | uncultured Brevundimonas sp. | ||
| 3277321 | 3277321 | PRJNA749559_P_NODE_4563_length_205_cov_0.888889_g4493_i0 | PRJNA749559 | 4563 | 205 | 0.888889 | 1.82222245 | Paracoccus sp. MC1862 | 2760307 | Bacteria | Bacteria | 183 | 6.08e-42 | NTclustered | gi|1955077297|gb|CP067225.1| | 2760307 | g4493 | i0 | 84.103 | 7.95609756097561 | 195 | 26 | 95 | 3 | 12 | 205 | 428452 | 428262 | Paracoccus sp. MC1862 chromosome, complete genome | blastn | 1631 | 183 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. MC1862 | ||
| 3751557 | 3751557 | PRJNA749559_P_NODE_2343_length_285_cov_1.080357_g2273_i0 | PRJNA749559 | 2343 | 285 | 1.080357 | 3.07901745 | Paracoccus | 265 | Bacteria | Bacteria | 494 | 3.64e-135 | NTclustered | gi|662020065|ref|NR_121952.1| | 34003 | g2273 | i0 | 98.227 | 197.119298245614 | 282 | 5 | 99 | 0 | 4 | 285 | 1360 | 1641 | Paracoccus aminophilus strain DM-15 23S ribosomal RNA gene, complete sequence | blastn | 56179 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus aminophilus | ||
| 3751559 | 3751559 | PRJNA749559_P_NODE_3583_length_227_cov_1.518072_g3513_i0 | PRJNA749559 | 3583 | 227 | 1.518072 | 3.44602344 | Escherichia | 561 | Bacteria | Bacteria | 414 | 2.2399999999999998e-111 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3513 | i0 | 99.559 | 100 | 227 | 1 | 100 | 0 | 1 | 227 | 420121 | 420347 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 22700 | 414 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3751560 | 3751560 | PRJNA749559_P_NODE_4483_length_206_cov_0.882759_g4413_i0 | PRJNA749559 | 4483 | 206 | 0.882759 | 1.81848354 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 375 | 9.41e-100 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4413 | i0 | 99.515 | 100 | 206 | 1 | 100 | 0 | 1 | 206 | 1081254 | 1081049 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20600 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4554475 | 4554475 | PRJNA749559_P_NODE_4524_length_206_cov_0.882759_g4454_i0 | PRJNA749559 | 4524 | 206 | 0.882759 | 1.81848354 | Acinetobacter lwoffii | 28090 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|1190228681|gb|CP019149.1| | 28090 | g4454 | i0 | 100 | 2.95145631067961 | 206 | 0 | 100 | 0 | 1 | 206 | 2668 | 2463 | Acinetobacter lwoffii strain ZS207 plasmid pZS-8, complete sequence | blastn | 608 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 5028135 | 5028135 | PRJNA749559_P_NODE_3064_length_247_cov_1.795699_g2994_i0 | PRJNA749559 | 3064 | 247 | 1.795699 | 4.43537653 | root | 1 | Root_unresolved | Root_unresolved | 457 | 4.05e-124 | NTclustered | gi|1240338358|gb|MF872585.1| | 472 | g2994 | i0 | 100 | 118 | 247 | 0 | 100 | 0 | 1 | 247 | 459 | 705 | Acinetobacter sp. strain 16_H3_M12 16S ribosomal RNA gene, partial sequence | blastn | 29146 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. | ||
| 5028137 | 5028137 | PRJNA749559_P_NODE_4124_length_209_cov_0.864865_g4054_i0 | PRJNA749559 | 4124 | 209 | 0.864865 | 1.80756785 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 387 | 4.42e-103 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4054 | i0 | 100 | 100 | 209 | 0 | 100 | 0 | 1 | 209 | 3454286 | 3454078 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20900 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 5028140 | 5028140 | PRJNA749559_P_NODE_4724_length_204_cov_0.895105_g4654_i0 | PRJNA749559 | 4724 | 204 | 0.895105 | 1.8260142 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4654 | i0 | 100 | 101 | 204 | 0 | 100 | 0 | 1 | 204 | 3608914 | 3609117 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20604 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7104644 | 7104644 | PRJNA749559_P_NODE_1486_length_369_cov_1.123377_g1416_i0 | PRJNA749559 | 1486 | 369 | 1.123377 | 4.14526113 | uncultured Alphaproteobacteria bacterium | 91750 | Bacteria | Bacteria | 291 | 6.83e-74 | NTclustered | gi|2874253800|emb|OY969784.1| | 91750 | g1416 | i0 | 81.944 | 6.0840108401084 | 360 | 50 | 97 | 13 | 6 | 363 | 305611 | 305265 | MAG: uncultured Alphaproteobacteria bacterium isolate MFD09603.bin.1.46 genome assembly, chromosome: 1 | blastn | 2245 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 7104646 | 7104646 | PRJNA749559_P_NODE_1706_length_339_cov_2.154676_g1636_i0 | PRJNA749559 | 1706 | 339 | 2.154676 | 7.30435164 | Amaricoccus sp. B4 | 3368557 | Bacteria | Bacteria | 499 | 9.51e-137 | NTclustered | gi|2832808638|gb|CP171226.1| | 3368557 | g1636 | i0 | 93.255 | 163.705014749263 | 341 | 19 | 100 | 4 | 1 | 339 | 120568 | 120230 | Amaricoccus sp. B4 plasmid unnamed1, complete sequence | blastn | 55496 | 499 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Amaricoccus | Amaricoccus sp. B4 | ||
| 7104678 | 7104678 | PRJNA749559_P_NODE_4826_length_203_cov_0.901408_g4756_i0 | PRJNA749559 | 4826 | 203 | 0.901408 | 1.82985824 | Moraxella sp. DOX410 | 3076087 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|2586132762|gb|CP135138.1| | 3076087 | g4756 | i0 | 100 | 4 | 203 | 0 | 100 | 0 | 1 | 203 | 2169619 | 2169821 | Moraxella sp. DOX410 chromosome, complete genome | blastn | 812 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. DOX410 | ||
| 7104680 | 7104680 | PRJNA749559_P_NODE_4926_length_202_cov_0.907801_g4856_i0 | PRJNA749559 | 4926 | 202 | 0.907801 | 1.83375802 | Moraxella sp. K23 | 3149047 | Bacteria | Bacteria | 346 | 7.2e-91 | NTclustered | gi|2740869040|dbj|AP031595.1| | 3149047 | g4856 | i0 | 97.525 | 16.3366336633663 | 202 | 5 | 100 | 0 | 1 | 202 | 1801824 | 1801623 | Moraxella sp. K23 DNA, complete genome | blastn | 3300 | 346 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. K23 | ||
| 7577795 | 7577795 | PRJNA749559_P_NODE_4026_length_212_cov_1.271523_g3956_i0 | PRJNA749559 | 4026 | 212 | 1.271523 | 2.69562876 | Escherichia | 561 | Bacteria | Bacteria | 392 | 9.67e-105 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3956 | i0 | 100 | 100 | 212 | 0 | 100 | 0 | 1 | 212 | 548730 | 548519 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 21200 | 392 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7577798 | 7577798 | PRJNA749559_P_NODE_5226_length_188_cov_2.015748_g5156_i0 | PRJNA749559 | 5226 | 188 | 2.015748 | 3.78960624 | Escherichia | 561 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g5156 | i0 | 100 | 100 | 188 | 0 | 100 | 0 | 1 | 188 | 2655784 | 2655597 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18800 | 348 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8379286 | 8379286 | PRJNA749559_P_NODE_4907_length_202_cov_0.907801_g4837_i0 | PRJNA749559 | 4907 | 202 | 0.907801 | 1.83375802 | Haematobacter massiliensis | 195105 | Bacteria | Bacteria | 374 | 3.3e-99 | NTclustered | gi|1586076053|gb|CP035511.1| | 195105 | g4837 | i0 | 100 | 1 | 202 | 0 | 100 | 0 | 1 | 202 | 210871 | 210670 | Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence | blastn | 202 | 374 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Haematobacter | Haematobacter massiliensis | ||
| 8852840 | 8852840 | PRJNA749559_P_NODE_3467_length_231_cov_1.600000_g3397_i0 | PRJNA749559 | 3467 | 231 | 1.6 | 3.696 | Moraxellaceae | 468 | Bacteria | Bacteria | 422 | 1.37e-113 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g3397 | i0 | 99.567 | 369.402597402597 | 231 | 1 | 100 | 0 | 1 | 231 | 1496315 | 1496545 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 85332 | 422 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 8852846 | 8852846 | PRJNA749559_P_NODE_4407_length_207_cov_0.876712_g4337_i0 | PRJNA749559 | 4407 | 207 | 0.876712 | 1.81479384 | Acinetobacter | 469 | Bacteria | Bacteria | 311 | 2.71e-80 | NTclustered | gi|2086772708|gb|CP080636.1| | 28090 | g4337 | i0 | 93.72 | 70.7826086956522 | 207 | 13 | 100 | 0 | 1 | 207 | 1488265 | 1488471 | Acinetobacter lwoffii strain EK30A chromosome, complete genome | blastn | 14652 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 8852847 | 8852847 | PRJNA749559_P_NODE_4747_length_204_cov_0.895105_g4677_i0 | PRJNA749559 | 4747 | 204 | 0.895105 | 1.8260142 | Cupriavidus | 106589 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2579713348|gb|CP130339.1| | 82541 | g4677 | i0 | 100 | 8.99509803921569 | 204 | 0 | 100 | 0 | 1 | 204 | 1076607 | 1076404 | Cupriavidus gilardii strain M5 chromosome 2, complete sequence | blastn | 1835 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus gilardii | ||
| 9654435 | 9654435 | PRJNA749559_P_NODE_4268_length_208_cov_0.870748_g4198_i0 | PRJNA749559 | 4268 | 208 | 0.870748 | 1.81115584 | Paracoccus sp. MC1862 | 2760307 | Bacteria | Bacteria | 281 | 2.13e-71 | NTclustered | gi|1955077297|gb|CP067225.1| | 2760307 | g4198 | i0 | 91.262 | 31.7019230769231 | 206 | 18 | 99 | 0 | 1 | 206 | 2875154 | 2875359 | Paracoccus sp. MC1862 chromosome, complete genome | blastn | 6594 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. MC1862 | ||
| 10128515 | 10128515 | PRJNA749559_P_NODE_3768_length_221_cov_1.600000_g3698_i0 | PRJNA749559 | 3768 | 221 | 1.6 | 3.536 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 409 | 1.0100000000000001e-109 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3698 | i0 | 100 | 100 | 221 | 0 | 100 | 0 | 1 | 221 | 3165796 | 3166016 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 22100 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10128517 | 10128517 | PRJNA749559_P_NODE_4628_length_205_cov_0.888889_g4558_i0 | PRJNA749559 | 4628 | 205 | 0.888889 | 1.82222245 | Massilia | 149698 | Bacteria | Bacteria | 296 | 7.49e-76 | NTclustered | gi|1390249357|gb|CP029343.1| | 945844 | g4558 | i0 | 93.069 | 37.7073170731707 | 202 | 14 | 99 | 0 | 4 | 205 | 3407383 | 3407584 | Massilia oculi strain CCUG 43427 chromosome, complete genome | blastn | 7730 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia oculi | ||
| 10929916 | 10929916 | PRJNA749559_P_NODE_3109_length_245_cov_1.635870_g3039_i0 | PRJNA749559 | 3109 | 245 | 1.63587 | 4.0078815 | Bradyrhizobium prioriisuperbiae | 2854389 | Bacteria | Bacteria | 409 | 1.1399999999999998e-109 | NTclustered | gi|2589062547|gb|CP135921.1| | 2854389 | g3039 | i0 | 96.748 | 117.412244897959 | 246 | 7 | 100 | 1 | 1 | 245 | 3519663 | 3519418 | Bradyrhizobium prioriisuperbiae strain BL16A chromosome, complete genome | blastn | 28766 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium prioriisuperbiae | ||
| 11403649 | 11403649 | PRJNA749559_P_NODE_4269_length_208_cov_0.870748_g4199_i0 | PRJNA749559 | 4269 | 208 | 0.870748 | 1.81115584 | Escherichia | 561 | Bacteria | Bacteria | 385 | 1.58e-102 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4199 | i0 | 100 | 100 | 208 | 0 | 100 | 0 | 1 | 208 | 1824480 | 1824687 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20800 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12205411 | 12205411 | PRJNA749559_P_NODE_4570_length_205_cov_0.888889_g4500_i0 | PRJNA749559 | 4570 | 205 | 0.888889 | 1.82222245 | Paracoccus sanguinis | 1545044 | Bacteria | Bacteria | 268 | 1.6299999999999998e-67 | NTclustered | gi|1834246727|gb|CP051542.1| | 1545044 | g4500 | i0 | 90.244 | 100.248780487805 | 205 | 20 | 100 | 0 | 1 | 205 | 616610 | 616814 | Paracoccus sanguinis strain OM2164 chromosome, complete genome | blastn | 20551 | 268 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sanguinis | ||
| 12205422 | 12205422 | PRJNA749559_P_NODE_5030_length_201_cov_0.914286_g4960_i0 | PRJNA749559 | 5030 | 201 | 0.914286 | 1.83771486 | Caulobacter soli | 2708539 | Bacteria | Bacteria | 333 | 5.569999999999999e-87 | NTclustered | gi|1817223896|gb|CP049200.1| | 2708539 | g4960 | i0 | 96.517 | 1 | 201 | 7 | 100 | 0 | 1 | 201 | 213477 | 213277 | Caulobacter soli strain Ji-3-8 plasmid unnamed | blastn | 201 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Caulobacter soli | ||
| 12679499 | 12679499 | PRJNA749559_P_NODE_3630_length_226_cov_1.163636_g3560_i0 | PRJNA749559 | 3630 | 226 | 1.163636 | 2.62981736 | Escherichia | 561 | Bacteria | Bacteria | 418 | 1.7199999999999998e-112 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3560 | i0 | 100 | 448.061946902655 | 226 | 0 | 100 | 0 | 1 | 226 | 1179641 | 1179866 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 101262 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12679501 | 12679501 | PRJNA749559_P_NODE_4510_length_206_cov_0.882759_g4440_i0 | PRJNA749559 | 4510 | 206 | 0.882759 | 1.81848354 | Escherichia | 561 | Bacteria | Bacteria | 381 | 2.0199999999999994e-101 | NTclustered | gi|2842041810|gb|CP164065.1| | 562 | g4440 | i0 | 100 | 100 | 206 | 0 | 100 | 0 | 1 | 206 | 2838807 | 2838602 | Escherichia coli strain OXEC-89 chromosome, complete genome | blastn | 20600 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13953812 | 13953812 | PRJNA749559_P_NODE_4271_length_208_cov_0.870748_g4201_i0 | PRJNA749559 | 4271 | 208 | 0.870748 | 1.81115584 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 385 | 1.58e-102 | NTclustered | gi|2161252967|gb|CP088071.1| | 562 | g4201 | i0 | 100 | 100 | 208 | 0 | 100 | 0 | 1 | 208 | 237754 | 237547 | Escherichia coli strain 427603 chromosome, complete genome | blastn | 20800 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 14754822 | 14754822 | PRJNA749559_P_NODE_4252_length_208_cov_0.870748_g4182_i0 | PRJNA749559 | 4252 | 208 | 0.870748 | 1.81115584 | Luteimonas sp. WGS1318 | 3366815 | Bacteria | Bacteria | 307 | 3.52e-79 | NTclustered | gi|2831348037|gb|CP171131.1| | 3366815 | g4182 | i0 | 93.269 | 29.9711538461538 | 208 | 14 | 100 | 0 | 1 | 208 | 96663 | 96870 | Luteimonas sp. WGS1318 chromosome, complete genome | blastn | 6234 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Luteimonas | Luteimonas sp. WGS1318 | ||
| 14754825 | 14754825 | PRJNA749559_P_NODE_4492_length_206_cov_0.882759_g4422_i0 | PRJNA749559 | 4492 | 206 | 0.882759 | 1.81848354 | Paracoccus sp. MC1862 | 2760307 | Bacteria | Bacteria | 248 | 2.14e-61 | NTclustered | gi|1955077297|gb|CP067225.1| | 2760307 | g4422 | i0 | 88.725 | 85.3883495145631 | 204 | 22 | 99 | 1 | 4 | 206 | 1960433 | 1960230 | Paracoccus sp. MC1862 chromosome, complete genome | blastn | 17590 | 248 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. MC1862 | ||
| 15228390 | 15228390 | PRJNA749559_P_NODE_4172_length_209_cov_0.864865_g4102_i0 | PRJNA749559 | 4172 | 209 | 0.864865 | 1.80756785 | Escherichia | 561 | Bacteria | Bacteria | 387 | 4.42e-103 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4102 | i0 | 100 | 101 | 209 | 0 | 100 | 0 | 1 | 209 | 3377432 | 3377224 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 21109 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15228391 | 15228391 | PRJNA749559_P_NODE_4472_length_206_cov_0.882759_g4402_i0 | PRJNA749559 | 4472 | 206 | 0.882759 | 1.81848354 | Rheinheimera | 67575 | Bacteria | Bacteria | 375 | 9.41e-100 | NTclustered | gi|1546439273|gb|CP034683.1| | 2498451 | g4402 | i0 | 99.515 | 825.825242718447 | 206 | 1 | 100 | 0 | 1 | 206 | 262957 | 262752 | Rheinheimera mangrovi strain LHK132 chromosome, complete genome | blastn | 170120 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera mangrovi | ||
| 16028618 | 16028618 | PRJNA749559_P_NODE_4253_length_208_cov_0.870748_g4183_i0 | PRJNA749559 | 4253 | 208 | 0.870748 | 1.81115584 | Paracoccus zhejiangensis | 1077935 | Bacteria | Bacteria | 165 | 2.24e-36 | NTclustered | gi|1317217976|gb|CP025430.1| | 1077935 | g4183 | i0 | 85.806 | 5.27884615384615 | 155 | 22 | 75 | 0 | 1 | 155 | 831090 | 831244 | Paracoccus zhejiangensis strain J6 chromosome, complete genome | blastn | 1098 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus zhejiangensis | ||
| 16028628 | 16028628 | PRJNA749559_P_NODE_4873_length_203_cov_0.802817_g4803_i0 | PRJNA749559 | 4873 | 203 | 0.802817 | 1.62971851 | Tepidimonas taiwanensis | 307486 | Bacteria | Bacteria | 353 | 4.33e-93 | NTclustered | gi|2102295900|gb|CP083911.1| | 307486 | g4803 | i0 | 98.03 | 194.532019704434 | 203 | 4 | 100 | 0 | 1 | 203 | 2755152 | 2754950 | Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome | blastn | 39490 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Tepidimonas | Tepidimonas taiwanensis | |||
| 16502830 | 16502830 | PRJNA749559_P_NODE_2413_length_280_cov_1.232877_g2343_i0 | PRJNA749559 | 2413 | 280 | 1.232877 | 3.4520556 | Acinetobacter | 469 | Bacteria | Bacteria | 518 | 2.12e-142 | NTclustered | gi|1958425625|gb|CP068206.1| | 40214 | g2343 | i0 | 100 | 680.396428571429 | 280 | 0 | 100 | 0 | 1 | 280 | 3045478 | 3045199 | Acinetobacter johnsonii strain FDAARGOS_1092 chromosome, complete genome | blastn | 190511 | 518 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 16502834 | 16502834 | PRJNA749559_P_NODE_4113_length_209_cov_1.729730_g4043_i0 | PRJNA749559 | 4113 | 209 | 1.72973 | 3.6151357 | Escherichia | 561 | Bacteria | Bacteria | 387 | 4.42e-103 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g4043 | i0 | 100 | 100 | 209 | 0 | 100 | 0 | 1 | 209 | 564431 | 564639 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 20900 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16502835 | 16502835 | PRJNA749559_P_NODE_4133_length_209_cov_0.864865_g4063_i0 | PRJNA749559 | 4133 | 209 | 0.864865 | 1.80756785 | Escherichia | 561 | Bacteria | Bacteria | 387 | 4.42e-103 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4063 | i0 | 100 | 100 | 209 | 0 | 100 | 0 | 1 | 209 | 1632122 | 1631914 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20900 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17304052 | 17304052 | PRJNA749559_P_NODE_4134_length_209_cov_0.864865_g4064_i0 | PRJNA749559 | 4134 | 209 | 0.864865 | 1.80756785 | Paracoccus sp. AK26 | 2589076 | Bacteria | Bacteria | 375 | 9.57e-100 | NTclustered | gi|1827008202|gb|CP041041.1| | 2589076 | g4064 | i0 | 99.043 | 1 | 209 | 2 | 100 | 0 | 1 | 209 | 239333 | 239541 | Paracoccus sp. AK26 chromosome, complete genome | blastn | 209 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. AK26 | ||
| 17304066 | 17304066 | PRJNA749559_P_NODE_4934_length_202_cov_0.907801_g4864_i0 | PRJNA749559 | 4934 | 202 | 0.907801 | 1.83375802 | Komagataeibacter diospyri | 1932662 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|2842100948|gb|CP171836.1| | 1932662 | g4864 | i0 | 100 | 0.138613861386139 | 28 | 0 | 14 | 0 | 12 | 39 | 1748918 | 1748891 | Komagataeibacter diospyri strain MI2 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Komagataeibacter | Komagataeibacter diospyri | ||
| 17304067 | 17304067 | PRJNA749559_P_NODE_4954_length_202_cov_0.907801_g4884_i0 | PRJNA749559 | 4954 | 202 | 0.907801 | 1.83375802 | Psychrobacter sp. WB2 | 256325 | Bacteria | Bacteria | 318 | 1.57e-82 | NTclustered | gi|2500968524|gb|CP124526.1| | 3043330 | g4884 | i0 | 95.05 | 3 | 202 | 10 | 100 | 0 | 1 | 202 | 2614283 | 2614484 | Psychrobacter sp. WB2 chromosome, complete genome | blastn | 606 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WB2 | ||
| 17304069 | 17304069 | PRJNA749559_P_NODE_5014_length_201_cov_0.914286_g4944_i0 | PRJNA749559 | 5014 | 201 | 0.914286 | 1.83771486 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 366 | 5.5e-97 | NTclustered | gi|2735198065|gb|CP156025.1| | 863372 | g4944 | i0 | 99.502 | 18.0696517412935 | 201 | 1 | 100 | 0 | 1 | 201 | 5492914 | 5493114 | Herbaspirillum huttiense strain CLJ01 chromosome, complete genome | blastn | 3632 | 366 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 17777575 | 17777575 | PRJNA749559_P_NODE_3614_length_226_cov_2.000000_g3544_i0 | PRJNA749559 | 3614 | 226 | 2 | 4.52 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 412 | 8.01e-111 | NTclustered | gi|2890447952|gb|CP177213.1| | 562 | g3544 | i0 | 99.558 | 822.384955752212 | 226 | 1 | 100 | 0 | 1 | 226 | 226989 | 227214 | Escherichia coli strain ECGI0223 chromosome, complete genome | blastn | 185859 | 412 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17777577 | 17777577 | PRJNA749559_P_NODE_4294_length_208_cov_0.870748_g4224_i0 | PRJNA749559 | 4294 | 208 | 0.870748 | 1.81115584 | Escherichia | 561 | Bacteria | Bacteria | 385 | 1.58e-102 | NTclustered | gi|2577338838|gb|CP125706.1| | 562 | g4224 | i0 | 100 | 100 | 208 | 0 | 100 | 0 | 1 | 208 | 2349207 | 2349414 | Escherichia coli strain DH5-alpha-pD25466-pBACpAK-COL-FM1-C1-10-1-5 chromosome | blastn | 20800 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18577680 | 18577680 | PRJNA749559_P_NODE_4195_length_209_cov_0.864865_g4125_i0 | PRJNA749559 | 4195 | 209 | 0.864865 | 1.80756785 | Pseudomonas putida | 303 | Bacteria | Bacteria | 387 | 4.42e-103 | NTclustered | gi|2233276315|gb|CP096581.1| | 303 | g4125 | i0 | 100 | 26.2918660287081 | 209 | 0 | 100 | 0 | 1 | 209 | 2606012 | 2605804 | Pseudomonas putida strain G7 chromosome, complete genome | blastn | 5495 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 18577681 | 18577681 | PRJNA749559_P_NODE_4255_length_208_cov_0.870748_g4185_i0 | PRJNA749559 | 4255 | 208 | 0.870748 | 1.81115584 | Pseudoduganella flava | 871742 | Bacteria | Bacteria | 307 | 3.52e-79 | NTclustered | gi|1787147051|gb|CP046904.1| | 871742 | g4185 | i0 | 93.269 | 95.2355769230769 | 208 | 14 | 100 | 0 | 1 | 208 | 3434752 | 3434545 | Pseudoduganella flava strain DSM 26639 chromosome, complete genome | blastn | 19809 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella flava | ||
| 19051605 | 19051605 | PRJNA749559_P_NODE_2115_length_300_cov_1.707113_g2045_i0 | PRJNA749559 | 2115 | 300 | 1.707113 | 5.121339 | Aeromonas | 642 | Bacteria | Bacteria | 544 | 3.78e-150 | NTclustered | gi|2264751159|dbj|AP026375.1| | 648 | g2045 | i0 | 99.663 | 836.796666666667 | 297 | 1 | 100 | 0 | 4 | 300 | 423125 | 422829 | Aeromonas caviae KAM497 DNA, complete genome | blastn | 251039 | 544 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas caviae | ||
| 19051610 | 19051610 | PRJNA749559_P_NODE_5055_length_201_cov_0.914286_g4985_i0 | PRJNA749559 | 5055 | 201 | 0.914286 | 1.83771486 | Paracoccus aeridis | 1966466 | Bacteria | Bacteria | 89.4 | 2.15e-19 | NR | WP_136649450.1 | 1966466 | g4985 | i0 | 98 | 0.746268656716418 | 50 | 1 | 74.6 | 0 | 52 | 201 | 1 | 50 | WP_136649450.1 LysR family transcriptional regulator [Paracoccus aeridis] | diamond | 150 | 89.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus aeridis | ||
| 19051611 | 19051611 | PRJNA749559_P_NODE_5275_length_175_cov_6.552632_g5205_i0 | PRJNA749559 | 5275 | 175 | 6.552632 | 11.467106 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 322 | 1.02e-83 | NTclustered | gi|1787147051|gb|CP046904.1| | 871742 | g5205 | i0 | 100 | 513.845714285714 | 174 | 0 | 99 | 0 | 1 | 174 | 3392412 | 3392239 | Pseudoduganella flava strain DSM 26639 chromosome, complete genome | blastn | 89923 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella flava | ||
| 19853021 | 19853021 | PRJNA749559_P_NODE_3776_length_221_cov_1.062500_g3706_i0 | PRJNA749559 | 3776 | 221 | 1.0625 | 2.348125 | Rheinheimera mangrovi | 2498451 | Bacteria | Bacteria | 394 | 2.8299999999999995e-105 | NTclustered | gi|1546439273|gb|CP034683.1| | 2498451 | g3706 | i0 | 98.661 | 622.891402714932 | 224 | 0 | 100 | 1 | 1 | 221 | 264024 | 264247 | Rheinheimera mangrovi strain LHK132 chromosome, complete genome | blastn | 137659 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera mangrovi | ||
| 19853022 | 19853022 | PRJNA749559_P_NODE_4156_length_209_cov_0.864865_g4086_i0 | PRJNA749559 | 4156 | 209 | 0.864865 | 1.80756785 | Sphingomonas leidyi | 68569 | Bacteria | Bacteria | 309 | 9.85e-80 | NTclustered | gi|2814041301|gb|CP170557.1| | 68569 | g4086 | i0 | 93.689 | 57.5502392344498 | 206 | 13 | 99 | 0 | 1 | 206 | 3617798 | 3618003 | Sphingomonas leidyi strain UC122_23 chromosome, complete genome | blastn | 12028 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas leidyi | ||
| 19853025 | 19853025 | PRJNA749559_P_NODE_4516_length_206_cov_0.882759_g4446_i0 | PRJNA749559 | 4516 | 206 | 0.882759 | 1.81848354 | Massilia sp. MP_M2 | 3071713 | Bacteria | Bacteria | 130 | 5.579999999999999e-34 | NR | WP_343026797.1 | 3071713 | g4446 | i0 | 97.1 | 0.990291262135922 | 68 | 2 | 99 | 0 | 206 | 3 | 33 | 100 | WP_343026797.1 hemolysin family protein [Massilia sp. MP_M2] | diamond | 204 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. MP_M2 | ||
| 19853028 | 19853028 | PRJNA749559_P_NODE_4776_length_203_cov_1.690141_g4706_i0 | PRJNA749559 | 4776 | 203 | 1.690141 | 3.43098623 | Paracoccus sp. AK26 | 2589076 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|1827008202|gb|CP041041.1| | 2589076 | g4706 | i0 | 100 | 1 | 203 | 0 | 100 | 0 | 1 | 203 | 324667 | 324869 | Paracoccus sp. AK26 chromosome, complete genome | blastn | 203 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sp. AK26 | ||
| 19853033 | 19853033 | PRJNA749559_P_NODE_4916_length_202_cov_0.907801_g4846_i0 | PRJNA749559 | 4916 | 202 | 0.907801 | 1.83375802 | Paracoccus sanguinis | 1545044 | Bacteria | Bacteria | 363 | 7.149999999999999e-96 | NTclustered | gi|1834246727|gb|CP051542.1| | 1545044 | g4846 | i0 | 99.01 | 11.0990099009901 | 202 | 2 | 100 | 0 | 1 | 202 | 392338 | 392137 | Paracoccus sanguinis strain OM2164 chromosome, complete genome | blastn | 2242 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sanguinis | ||
| 20326319 | 20326319 | PRJNA749559_P_NODE_2116_length_300_cov_1.665272_g2046_i0 | PRJNA749559 | 2116 | 300 | 1.665272 | 4.995816 | root | 1 | Root_unresolved | Root_unresolved | 527 | 3.799999999999999e-145 | NTclustered | gi|2842886548|gb|CP171997.1| | 47920 | g2046 | i0 | 98.339 | 337.006666666667 | 301 | 3 | 100 | 2 | 1 | 300 | 2109 | 2408 | Acidovorax delafieldii strain UC81_30 chromosome, complete genome | blastn | 101102 | 527 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax delafieldii | ||
| 20326322 | 20326322 | PRJNA749559_P_NODE_4196_length_209_cov_0.864865_g4126_i0 | PRJNA749559 | 4196 | 209 | 0.864865 | 1.80756785 | Escherichia | 561 | Bacteria | Bacteria | 381 | 2.0599999999999996e-101 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g4126 | i0 | 99.522 | 100 | 209 | 1 | 100 | 0 | 1 | 209 | 2847411 | 2847619 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 20900 | 381 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21602051 | 21602051 | PRJNA749559_P_NODE_3397_length_234_cov_1.109827_g3327_i0 | PRJNA749559 | 3397 | 234 | 1.109827 | 2.59699518 | Escherichia | 561 | Bacteria | Bacteria | 433 | 6.41e-117 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3327 | i0 | 100 | 100 | 234 | 0 | 100 | 0 | 1 | 234 | 4481764 | 4481531 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 23400 | 433 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21602052 | 21602052 | PRJNA749559_P_NODE_3597_length_227_cov_1.156627_g3527_i0 | PRJNA749559 | 3597 | 227 | 1.156627 | 2.62554329 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 361 | 2.96e-95 | NTclustered | gi|2204876709|gb|CP049334.1| | 964 | g3527 | i0 | 95.946 | 358.766519823789 | 222 | 9 | 98 | 0 | 1 | 222 | 522456 | 522677 | Herbaspirillum seropedicae strain Z69 chromosome | blastn | 81440 | 364 | 0.991758241758242 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum seropedicae | ||
| 22403376 | 22403376 | PRJNA749559_P_NODE_4958_length_202_cov_0.907801_g4888_i0 | PRJNA749559 | 4958 | 202 | 0.907801 | 1.83375802 | Telluria beijingensis | 3068633 | Bacteria | Bacteria | 191 | 3.57e-44 | NTclustered | gi|2563947646|gb|CP132480.1| | 3068633 | g4888 | i0 | 83.663 | 2.6831683168316798 | 202 | 33 | 100 | 0 | 1 | 202 | 2291783 | 2291582 | Telluria beijingensis strain REN29 chromosome | blastn | 542 | 191 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Telluria | Telluria beijingensis | ||
| 22403377 | 22403377 | PRJNA749559_P_NODE_4998_length_201_cov_0.914286_g4928_i0 | PRJNA749559 | 4998 | 201 | 0.914286 | 1.83771486 | Brevundimonas mediterranea | 74329 | Bacteria | Bacteria | 285 | 1.58e-72 | NTclustered | gi|1818839734|gb|CP048751.1| | 74329 | g4928 | i0 | 92.857 | 88.6716417910448 | 196 | 14 | 98 | 0 | 6 | 201 | 3371734 | 3371539 | Brevundimonas mediterranea strain D151-2-6 chromosome, complete genome | blastn | 17823 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas mediterranea | ||
| 24151468 | 24151468 | PRJNA749559_P_NODE_3279_length_238_cov_1.446328_g3209_i0 | PRJNA749559 | 3279 | 238 | 1.446328 | 3.44226064 | Escherichia | 561 | Bacteria | Bacteria | 440 | 3.899999999999999e-119 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g3209 | i0 | 100 | 100 | 238 | 0 | 100 | 0 | 1 | 238 | 1371055 | 1370818 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 23800 | 440 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 24952470 | 24952470 | PRJNA749559_P_NODE_3880_length_217_cov_1.141026_g3810_i0 | PRJNA749559 | 3880 | 217 | 1.141026 | 2.47602642 | Sphingobium yanoikuyae | 13690 | Bacteria | Bacteria | 348 | 2.1800000000000002e-91 | NTclustered | gi|1893047889|gb|CP060122.1| | 13690 | g3810 | i0 | 96.226 | 31.1428571428571 | 212 | 8 | 98 | 0 | 1 | 212 | 2836387 | 2836598 | Sphingobium yanoikuyae strain A3 chromosome, complete genome | blastn | 6758 | 348 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Sphingobium yanoikuyae | ||
| 24952481 | 24952481 | PRJNA749559_P_NODE_5060_length_201_cov_0.914286_g4990_i0 | PRJNA749559 | 5060 | 201 | 0.914286 | 1.83771486 | Brevundimonas sp. PAMC22021 | 2861285 | Bacteria | Bacteria | 255 | 1.24e-63 | NTclustered | gi|2075543300|gb|CP080376.1| | 2861285 | g4990 | i0 | 89.552 | 6.61194029850746 | 201 | 21 | 100 | 0 | 1 | 201 | 1250725 | 1250525 | Brevundimonas sp. PAMC22021 chromosome, complete genome | blastn | 1329 | 255 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas sp. PAMC22021 | ||
| 25426468 | 25426468 | PRJNA749559_P_NODE_4240_length_208_cov_0.870748_g4170_i0 | PRJNA749559 | 4240 | 208 | 0.870748 | 1.81115584 | Paracoccus | 265 | Bacteria | Bacteria | 206 | 1.32e-48 | NTclustered | gi|2179279614|gb|CP090836.1| | 2903900 | g4170 | i0 | 85.641 | 5.79807692307692 | 195 | 28 | 94 | 0 | 1 | 195 | 2599206 | 2599012 | Paracoccus everestensis strain S8-55 chromosome, complete genome | blastn | 1206 | 206 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus everestensis | ||
| 25426470 | 25426470 | PRJNA749559_P_NODE_5000_length_201_cov_0.914286_g4930_i0 | PRJNA749559 | 5000 | 201 | 0.914286 | 1.83771486 | Paracoccus | 265 | Bacteria | Bacteria | 255 | 1.24e-63 | NTclustered | gi|1184809263|gb|CP020612.1| | 1945662 | g4930 | i0 | 94.545 | 80.910447761194 | 165 | 9 | 82 | 0 | 1 | 165 | 1462467 | 1462631 | Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T chromosome, complete genome | blastn | 16263 | 255 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus contaminans | ||
| 27905353 | 27905353 | PRJNA749559_P_NODE_4525_length_206_cov_0.882759_g4455_i0 | PRJNA749559 | 4525 | 206 | 0.882759 | 1.81848354 | Brevundimonas intermedia | 74315 | Bacteria | Bacteria | 43.5 | 0.0125 | NR | WP_167762577.1 | 74315 | g4455 | i0 | 55.8 | 1.25242718446602 | 43 | 19 | 62.6 | 0 | 146 | 18 | 1 | 43 | WP_167762577.1 TonB-dependent receptor [Brevundimonas intermedia] | diamond | 258 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Brevundimonas | Brevundimonas intermedia | ||
| 28000555 | 28000555 | PRJNA749559_P_NODE_5145_length_194_cov_2.300752_g5075_i0 | PRJNA749559 | 5145 | 194 | 2.300752 | 4.46345888 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 99.8 | 3.12e-25 | NR | MEL6702651.1 | 1977087 | g5075 | i0 | 71 | 0.958762886597938 | 62 | 18 | 95.9 | 0 | 191 | 6 | 18 | 79 | MEL6702651.1 30S ribosomal protein S11 [Pseudomonadota bacterium] | diamond | 186 | 99.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 28347635 | 28347635 | PRJNA749559_P_NODE_1366_length_387_cov_2.515337_g1296_i0 | PRJNA749559 | 1366 | 387 | 2.515337 | 9.73435419 | Enterobacter asburiae | 61645 | Bacteria | Bacteria | 49.7 | 3.25e-5 | NR | WP_236551201.1 | 61645 | g1296 | i0 | 55.6 | 0.348837209302326 | 45 | 15 | 31 | 1 | 124 | 5 | 16 | 60 | WP_236551201.1 hypothetical protein, partial [Enterobacter asburiae] | diamond | 135 | 49.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter asburiae | ||
| 29011087 | 29011087 | PRJNA749559_P_NODE_2928_length_253_cov_1.333333_g2858_i0 | PRJNA749559 | 2928 | 253 | 1.333333 | 3.37333249 | Psychromonas sp. PRT-SC | 1884585 | Bacteria | Bacteria | 41.2 | 0.0223 | NR | KPU83399.1 | 1527299 | g2858 | i0 | 71.4 | 0.49802371541502 | 42 | 12 | 49.8 | 0 | 2 | 127 | 30 | 71 | KPU83399.1 hypothetical protein JI57_01495 [Psychromonas sp. PRT-SC03] | diamond | 126 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Psychromonadaceae | Psychromonas | Psychromonas sp. PRT-SC03 | ||
| 29420973 | 29420973 | PRJNA749559_P_NODE_4729_length_204_cov_0.895105_g4659_i0 | PRJNA749559 | 4729 | 204 | 0.895105 | 1.8260142 | Kingella | 32257 | Bacteria | Bacteria | 119 | 6.849999999999998e-30 | NR | WP_238748364.1 | 32257 | g4659 | i0 | 98.5 | 0.985294117647059 | 67 | 1 | 98.5 | 0 | 202 | 2 | 150 | 216 | WP_238748364.1 MULTISPECIES: sugar MFS transporter [Kingella] | diamond | 201 | 119 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Kingella | |||
| 29420974 | 29420974 | PRJNA749559_P_NODE_5049_length_201_cov_0.914286_g4979_i0 | PRJNA749559 | 5049 | 201 | 0.914286 | 1.83771486 | Paracoccus litorisediminis | 2006130 | Bacteria | Bacteria | 62 | 3.4e-9 | NR | WP_394207910.1 | 2006130 | g4979 | i0 | 50 | 0.865671641791045 | 58 | 29 | 86.6 | 0 | 11 | 184 | 48 | 105 | WP_394207910.1 TraM recognition domain-containing protein [Paracoccus litorisediminis] | diamond | 174 | 62 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus litorisediminis | ||
| 30274227 | 30274227 | PRJNA749559_P_NODE_5072_length_201_cov_0.907143_g5002_i0 | PRJNA749559 | 5072 | 201 | 0.907143 | 1.82335743 | Neorhizobium sp. AL 9.2.2 | 2712894 | Bacteria | Bacteria | 111 | 4.23e-27 | NR | WP_174196975.1 | 2712894 | g5002 | i0 | 96.6 | 0.880597014925373 | 59 | 2 | 88.1 | 0 | 200 | 24 | 384 | 442 | WP_174196975.1 PLP-dependent aminotransferase family protein [Neorhizobium sp. AL 9.2.2] | diamond | 177 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Neorhizobium | Neorhizobium sp. AL 9.2.2 | ||
| 31126653 | 31126653 | PRJNA749559_P_NODE_4955_length_202_cov_0.907801_g4885_i0 | PRJNA749559 | 4955 | 202 | 0.907801 | 1.83375802 | Rhizobium sp. CC-YZS | 391 | Bacteria | Bacteria | 60.8 | 3.38e-9 | NR | WP_323106240.1 | 3042153 | g4885 | i0 | 100 | 0.415841584158416 | 28 | 0 | 41.6 | 0 | 117 | 200 | 1 | 28 | WP_323106240.1 YitT family protein [Rhizobium sp. CC-YZS058] | diamond | 84 | 60.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium sp. CC-YZS058 | ||
| 31358390 | 31358390 | PRJNA749559_P_NODE_4636_length_205_cov_0.888889_g4566_i0 | PRJNA749559 | 4636 | 205 | 0.888889 | 1.82222245 | Moraxellaceae | 468 | Bacteria | Bacteria | 124 | 2.3699999999999998e-32 | NR | WP_219332801.1 | 34062 | g4566 | i0 | 86.8 | 1.9609756097561 | 68 | 9 | 99.5 | 0 | 204 | 1 | 242 | 309 | WP_219332801.1 glycosyltransferase [Moraxella osloensis] | diamond | 402 | 125 | 0.992 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 31579846 | 31579846 | PRJNA749559_P_NODE_1916_length_316_cov_5.533333_g1846_i0 | PRJNA749559 | 1916 | 316 | 5.533333 | 17.48533228 | Bacteria | 2 | Bacteria | Bacteria | 99.8 | 7.67e-25 | NR | WP_077633843.1 | 562 | g1846 | i0 | 65.1 | 1.68987341772152 | 83 | 29 | 78.8 | 0 | 4 | 252 | 11 | 93 | WP_077633843.1 hypothetical protein, partial [Escherichia coli] | diamond | 534 | 100 | 0.998 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31706190 | 31706190 | PRJNA749559_P_NODE_4397_length_207_cov_0.876712_g4327_i0 | PRJNA749559 | 4397 | 207 | 0.876712 | 1.81479384 | Paracoccaceae | 31989 | Bacteria | Bacteria | 99.8 | 1.94e-22 | NR | WP_194886561.1 | 265 | g4327 | i0 | 92.7 | 3.98550724637681 | 55 | 4 | 79.7 | 0 | 167 | 3 | 5 | 59 | WP_194886561.1 MULTISPECIES: PhoX family protein [Paracoccus] | diamond | 825 | 100 | 0.998 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | |||
| 31759472 | 31759472 | PRJNA749559_P_NODE_4197_length_209_cov_0.864865_g4127_i0 | PRJNA749559 | 4197 | 209 | 0.864865 | 1.80756785 | Paracoccus aeridis | 1966466 | Bacteria | Bacteria | 132 | 7.52e-36 | NR | WP_136652656.1 | 1966466 | g4127 | i0 | 100 | 0.990430622009569 | 69 | 0 | 99 | 0 | 207 | 1 | 75 | 143 | WP_136652656.1 LysR family transcriptional regulator [Paracoccus aeridis] | diamond | 207 | 132 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus aeridis | ||
| 32044275 | 32044275 | PRJNA749559_P_NODE_4358_length_207_cov_0.876712_g4288_i0 | PRJNA749559 | 4358 | 207 | 0.876712 | 1.81479384 | Rhizobium sp. Leaf3 | 391 | Bacteria | Bacteria | 135 | 5.65e-35 | NR | WP_062456708.1 | 1736330 | g4288 | i0 | 100 | 1 | 69 | 0 | 100 | 0 | 207 | 1 | 192 | 260 | WP_062456708.1 DUF3971 domain-containing protein [Rhizobium sp. Leaf306] | diamond | 207 | 135 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium sp. Leaf306 | ||
| 32202500 | 32202500 | PRJNA749559_P_NODE_4258_length_208_cov_0.870748_g4188_i0 | PRJNA749559 | 4258 | 208 | 0.870748 | 1.81115584 | Devosia sp. | 1871048 | Bacteria | Bacteria | 97.4 | 3.3e-22 | NR | WP_295415036.1 | 1871048 | g4188 | i0 | 71.6 | 2.92788461538462 | 67 | 19 | 96.6 | 0 | 1 | 201 | 205 | 271 | WP_295415036.1 ABC transporter ATP-binding protein [Devosia sp.] | diamond | 609 | 97.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Devosiaceae | Devosia | Devosia sp. | ||
| 32360919 | 32360919 | PRJNA749559_P_NODE_4739_length_204_cov_0.895105_g4669_i0 | PRJNA749559 | 4739 | 204 | 0.895105 | 1.8260142 | Paracoccus marcusii | 59779 | Bacteria | Bacteria | 91.3 | 3.4e-20 | NR | WP_373947273.1 | 59779 | g4669 | i0 | 75 | 0.941176470588235 | 64 | 16 | 94.1 | 0 | 202 | 11 | 232 | 295 | WP_373947273.1 EamA family transporter [Paracoccus marcusii] | diamond | 192 | 91.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus marcusii | ||
| 32739646 | 32739646 | PRJNA749559_P_NODE_2500_length_275_cov_0.967290_g2430_i0 | PRJNA749559 | 2500 | 275 | 0.96729 | 2.6600475 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 44.3 | 0.0152 | NR | WP_395588599.1 | 251699 | g2430 | i0 | 50 | 2.07272727272727 | 40 | 19 | 43.6 | 1 | 40 | 159 | 294 | 332 | WP_395588599.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 570 | 44.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;