RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA749559" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA749559 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1199842 1199842 PRJNA749559_P_NODE_5161_length_193_cov_2.340909_g5091_i0 PRJNA749559 5161 193 2.340909 4.51795437 Malassezia 55193 Fungi Fungi 357 3.1499999999999996e-94   NTclustered gi|1101565660|gb|KX839636.1| 55194 g5091 i0 100 100 193 0 100 0 1 193 63 255 Malassezia furfur isolate GDMUZJ2015102 26S ribosomal RNA gene, partial sequence blastn 19300 357 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
8379276 8379276 PRJNA749559_P_NODE_4427_length_206_cov_2.413793_g4357_i0 PRJNA749559 4427 206 2.413793 4.9724135800000004 Filobasidium floriforme 5210 Fungi Fungi 126 1.05e-24   NTclustered gi|2185522900|ref|XM_046184655.1| 5210 g4357 i0 83.212 8.09708737864078 137 23 67 0 13 149 621 757 Filobasidium floriforme 60s ribosomal protein l11 (HD553DRAFT_99389), mRNA blastn 1668 126 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
9654423 9654423 PRJNA749559_P_NODE_2848_length_256_cov_3.928205_g2778_i0 PRJNA749559 2848 256 3.928205 10.0562048 Malassezia restricta 76775 Fungi Fungi 473 4.189999999999999e-129   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2778 i0 100 101.1875 256 0 100 0 1 256 1738 1483 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 25904 473 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10929924 10929924 PRJNA749559_P_NODE_4449_length_206_cov_0.882759_g4379_i0 PRJNA749559 4449 206 0.882759 1.81848354 Malassezia restricta 76775 Fungi Fungi 348 2.05e-91   NTclustered gi|1546632388|ref|XM_027627854.1| 76775 g4379 i0 97.087 1.61650485436893 206 6 100 0 1 206 1760 1965 Malassezia restricta DNA polymerase zeta (MRET_1227), partial mRNA blastn 333 348 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12205405 12205405 PRJNA749559_P_NODE_4130_length_209_cov_0.864865_g4060_i0 PRJNA749559 4130 209 0.864865 1.80756785 Malassezia arunalokei 1514897 Fungi Fungi 372 1.24e-98   NTclustered gi|2692937071|ref|NC_086476.1| 1514897 g4060 i0 99.034 89.6315789473684 207 2 99 0 1 207 33459 33665 Malassezia arunalokei culture CBS:13387 strain CBS13387 mitochondrion, complete genome blastn 18733 372 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
13479769 13479769 PRJNA749559_P_NODE_2131_length_299_cov_1.050420_g2061_i0 PRJNA749559 2131 299 1.05042 3.1407558 Auricularia auricula-judae 29892 Fungi Fungi 492 1.3799999999999996e-134   NTclustered gi|363987639|gb|JN712676.1| 29892 g2061 i0 96.321 104.056856187291 299 11 100 0 1 299 4120 3822 Auricularia auricula-judae strain AU110 18S ribosomal RNA gene, partial sequence; internal transcribed spacer, 28S ribosomal RNA gene, intergenic spacer 1, and 5S ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence blastn 31113 492 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Auriculariales Auriculariaceae Auricularia Auricularia auricula-judae
17304039 17304039 PRJNA749559_P_NODE_2794_length_259_cov_3.015152_g2724_i0 PRJNA749559 2794 259 3.015152 7.80924368 Malassezia restricta 76775 Fungi Fungi 316 7.58e-82   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2724 i0 89.615 67.2625482625483 260 12 100 11 1 259 3041 3286 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 17421 316 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17304070 17304070 PRJNA749559_P_NODE_5074_length_201_cov_0.878571_g5004_i0 PRJNA749559 5074 201 0.878571 1.76592771 Malassezia globosa 76773 Fungi Fungi 361 2.5599999999999998e-95   NTclustered gi|164661484|ref|XM_001731813.1| 425265 g5004 i0 99.005 1 201 2 100 0 1 201 3210 3410 Malassezia globosa CBS 7966 uncharacterized protein (MGL_1133), partial mRNA blastn 201 361 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
23678923 23678923 PRJNA749559_P_NODE_2719_length_263_cov_1.267327_g2649_i0 PRJNA749559 2719 263 1.267327 3.33307001 Geastrum sp. 1 GMB-2014 1589092 Fungi Fungi 128 3.88e-25   NTclustered gi|757958342|gb|KP012757.1| 1589092 g2649 i0 90.722 36.361216730038 97 8 37 1 1 97 533 628 Geastrum sp. 1 GMB-2014 voucher MEL:2382886 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9563 128 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Geastrales Geastraceae Geastrum Geastrum sp. 1 GMB-2014

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;