RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA745923" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA745923 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29704892 29704892 PRJNA745923_S_NODE_22350_length_205_cov_3.179012_g22018_i0 PRJNA745923 22350 205 3.179012 6.5169746 Archangium sp. 1872627 Bacteria Bacteria 45.8 0.00183   NR MFT3713681.1 1872627 g22018 i0 34.9 0.921951219512195 63 41 92.2 0 15 203 797 859 MFT3713681.1 hypothetical protein [Archangium sp.] diamond 189 45.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
30052605 30052605 PRJNA745923_S_NODE_29691_length_175_cov_1.401515_g29359_i0 PRJNA745923 29691 175 1.401515 2.45265125 Polyangia bacterium 3058050 Bacteria Bacteria 45.4 0.00167   NR HXU06707.1 3058050 g29359 i0 52.6 0.651428571428571 38 17 65.1 1 43 156 94 130 HXU06707.1 zinc-binding dehydrogenase [Polyangia bacterium] diamond 114 45.4 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;