contig_metadata
27 rows where bioproject = "PRJNA745923" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2000928 | 2000928 | PRJNA745923_S_NODE_34642_length_161_cov_0.974576_g34310_i0 | PRJNA745923 | 34642 | 161 | 0.974576 | 1.56906736 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|1818008110|gb|CP049223.1| | 147802 | g34310 | i0 | 100 | 11.6521739130435 | 161 | 0 | 100 | 0 | 1 | 161 | 1156693 | 1156533 | Lactobacillus iners strain C0094A1 chromosome, complete genome | blastn | 1876 | 298 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 4553480 | 4553480 | PRJNA745923_S_NODE_40564_length_150_cov_0.897196_g40232_i0 | PRJNA745923 | 40564 | 150 | 0.897196 | 1.345794 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 272 | 8.609999999999998e-69 | NTclustered | gi|1818001851|gb|CP049231.1| | 147802 | g40232 | i0 | 99.333 | 74.3333333333333 | 150 | 1 | 100 | 0 | 1 | 150 | 166451 | 166302 | Lactobacillus iners strain C0254C1 chromosome, complete genome | blastn | 11150 | 272 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 5027118 | 5027118 | PRJNA745923_S_NODE_24184_length_197_cov_1.558442_g23852_i0 | PRJNA745923 | 24184 | 197 | 1.558442 | 3.07013074 | Streptococcus | 1301 | Bacteria | Bacteria | 359 | 8.98e-95 | NTclustered | gi|2625184810|dbj|AP026968.1| | 2993430 | g23852 | i0 | 99.492 | 100 | 197 | 1 | 100 | 0 | 1 | 197 | 904803 | 904607 | Streptococcus sp. SP4011 DNA, complete genome | blastn | 19700 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus parapneumoniae | ||
| 7103526 | 7103526 | PRJNA745923_S_NODE_32726_length_166_cov_1.170732_g32394_i0 | PRJNA745923 | 32726 | 166 | 1.170732 | 1.94341512 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g32394 | i0 | 100 | 13 | 166 | 0 | 100 | 0 | 1 | 166 | 1302998 | 1302833 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 2158 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 7576740 | 7576740 | PRJNA745923_S_NODE_13206_length_280_cov_1.759494_g12874_i0 | PRJNA745923 | 13206 | 280 | 1.759494 | 4.9265832 | root | 1 | Root_unresolved | Root_unresolved | 512 | 9.85e-141 | NTclustered | gi|1821622467|dbj|LC377539.1| | 1280 | g12874 | i0 | 99.643 | 116.017857142857 | 280 | 1 | 100 | 0 | 1 | 280 | 12113 | 12392 | Staphylococcus aureus plasmid pNTUH_6457 NTUH_6457 DNA, complete sequence | blastn | 32485 | 512 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8378163 | 8378163 | PRJNA745923_S_NODE_31587_length_169_cov_1.523810_g31255_i0 | PRJNA745923 | 31587 | 169 | 1.52381 | 2.5752389 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|1818004205|gb|CP049228.1| | 147802 | g31255 | i0 | 100 | 12.603550295858 | 169 | 0 | 100 | 0 | 1 | 169 | 1165023 | 1165191 | Lactobacillus iners strain C0210C1 chromosome, complete genome | blastn | 2130 | 313 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 8851876 | 8851876 | PRJNA745923_S_NODE_23407_length_200_cov_3.057325_g23075_i0 | PRJNA745923 | 23407 | 200 | 3.057325 | 6.11465 | Streptococcus | 1301 | Bacteria | Bacteria | 370 | 4.22e-98 | NTclustered | gi|2886510793|emb|OZ217345.1| | 28037 | g23075 | i0 | 100 | 312 | 200 | 0 | 100 | 0 | 1 | 200 | 19737 | 19936 | Streptococcus mitis isolate S. mitis F22 genome assembly, chromosome: 1 | blastn | 62400 | 370 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 9653040 | 9653040 | PRJNA745923_S_NODE_15908_length_252_cov_1.837321_g15576_i0 | PRJNA745923 | 15908 | 252 | 1.837321 | 4.63004892 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g15576 | i0 | 100 | 100.345238095238 | 252 | 0 | 100 | 0 | 1 | 252 | 1048566 | 1048315 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 25287 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 10928715 | 10928715 | PRJNA745923_S_NODE_27529_length_183_cov_1.028571_g27197_i0 | PRJNA745923 | 27529 | 183 | 1.028571 | 1.88228493 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g27197 | i0 | 100 | 13 | 183 | 0 | 100 | 0 | 1 | 183 | 892847 | 892665 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 2379 | 339 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 10928851 | 10928851 | PRJNA745923_S_NODE_36509_length_156_cov_1.274336_g36177_i0 | PRJNA745923 | 36509 | 156 | 1.274336 | 1.98796416 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 289 | 9e-74 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g36177 | i0 | 100 | 99.5897435897436 | 156 | 0 | 100 | 0 | 1 | 156 | 419326 | 419481 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 15536 | 289 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 10928852 | 10928852 | PRJNA745923_S_NODE_36709_length_155_cov_3.107143_g36377_i0 | PRJNA745923 | 36709 | 155 | 3.107143 | 4.81607165 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 254 | 3.25e-63 | NTclustered | gi|1851386209|gb|CP047883.1| | 28037 | g36377 | i0 | 97.945 | 31.6258064516129 | 146 | 3 | 94 | 0 | 1 | 146 | 1788604 | 1788749 | Streptococcus mitis strain S022-V3-A4 chromosome, complete genome | blastn | 4902 | 254 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 10928979 | 10928979 | PRJNA745923_S_NODE_8309_length_364_cov_2.557632_g7977_i0 | PRJNA745923 | 8309 | 364 | 2.557632 | 9.30978048 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g7977 | i0 | 100 | 84.7664835164835 | 363 | 0 | 99 | 0 | 2 | 364 | 357944 | 357582 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 30855 | 671 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 12204199 | 12204199 | PRJNA745923_S_NODE_24570_length_195_cov_2.092105_g24238_i0 | PRJNA745923 | 24570 | 195 | 2.092105 | 4.07960475 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 350 | 5.34e-92 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g24238 | i0 | 98.974 | 99.6666666666667 | 195 | 2 | 100 | 0 | 1 | 195 | 1008667 | 1008473 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 19435 | 350 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 12204245 | 12204245 | PRJNA745923_S_NODE_27510_length_183_cov_1.028571_g27178_i0 | PRJNA745923 | 27510 | 183 | 1.028571 | 1.88228493 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g27178 | i0 | 100 | 13 | 183 | 0 | 100 | 0 | 1 | 183 | 358917 | 358735 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 2379 | 339 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 14753868 | 14753868 | PRJNA745923_S_NODE_5592_length_462_cov_3.078759_g5265_i0 | PRJNA745923 | 5592 | 462 | 3.078759 | 14.22386658 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 848 | 0 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g5265 | i0 | 99.784 | 98.7878787878788 | 462 | 1 | 100 | 0 | 1 | 462 | 1049692 | 1049231 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 45640 | 848 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 15227384 | 15227384 | PRJNA745923_S_NODE_24812_length_194_cov_1.894040_g24480_i0 | PRJNA745923 | 24812 | 194 | 1.89404 | 3.6744376 | root | 1 | Root_unresolved | Root_unresolved | 337 | 4.13e-88 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g24480 | i0 | 97.938 | 105.345360824742 | 194 | 4 | 100 | 0 | 1 | 194 | 1394 | 1201 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 20437 | 337 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 17776650 | 17776650 | PRJNA745923_S_NODE_32554_length_166_cov_2.186992_g32222_i0 | PRJNA745923 | 32554 | 166 | 2.186992 | 3.63040672 | Paenibacillus | 44249 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|1373996327|gb|CP028366.1| | 59843 | g32222 | i0 | 100 | 5.51807228915663 | 166 | 0 | 100 | 0 | 1 | 166 | 5377113 | 5377278 | Paenibacillus glucanolyticus strain W10507 chromosome | blastn | 916 | 307 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 18576309 | 18576309 | PRJNA745923_S_NODE_18655_length_228_cov_3.027027_g18323_i0 | PRJNA745923 | 18655 | 228 | 3.027027 | 6.90162156 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 145 | 1.6499999999999999e-38 | NR | MBR5873559.1 | 2485925 | g18323 | i0 | 97.3 | 2.96052631578947 | 75 | 2 | 98.7 | 0 | 226 | 2 | 359 | 433 | MBR5873559.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Oscillospiraceae bacterium] | diamond | 675 | 145 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 18576311 | 18576311 | PRJNA745923_S_NODE_18695_length_228_cov_2.075676_g18363_i0 | PRJNA745923 | 18695 | 228 | 2.075676 | 4.73254128 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g18363 | i0 | 100 | 89.5745614035088 | 228 | 0 | 100 | 0 | 1 | 228 | 1047913 | 1048140 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 20423 | 422 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 21127295 | 21127295 | PRJNA745923_S_NODE_23077_length_202_cov_1.207547_g22745_i0 | PRJNA745923 | 23077 | 202 | 1.207547 | 2.43924494 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 368 | 1.54e-97 | NTclustered | gi|2769738725|gb|CP160077.1| | 147802 | g22745 | i0 | 99.505 | 12.0792079207921 | 202 | 1 | 100 | 0 | 1 | 202 | 1274740 | 1274539 | Lactobacillus iners strain 0809_588_1_1_MRS1 chromosome, complete genome | blastn | 2440 | 368 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 23677677 | 23677677 | PRJNA745923_S_NODE_20899_length_214_cov_1.380117_g20567_i0 | PRJNA745923 | 20899 | 214 | 1.380117 | 2.95345038 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 396 | 7.559999999999996e-106 | NTclustered | gi|1818003035|gb|CP049230.1| | 147802 | g20567 | i0 | 100 | 52.8738317757009 | 214 | 0 | 100 | 0 | 1 | 214 | 578178 | 578391 | Lactobacillus iners strain C0322A1 chromosome, complete genome | blastn | 11315 | 396 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 24150561 | 24150561 | PRJNA745923_S_NODE_39939_length_150_cov_4.616822_g39607_i0 | PRJNA745923 | 39939 | 150 | 4.616822 | 6.925233 | root | 1 | Root_unresolved | Root_unresolved | 272 | 8.609999999999998e-69 | NTclustered | gi|1796972337|gb|CP033085.1| | 1280 | g39607 | i0 | 99.333 | 100.886666666667 | 150 | 1 | 100 | 0 | 1 | 150 | 2730106 | 2729957 | Staphylococcus aureus strain WH3018 chromosome | blastn | 15133 | 272 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 24951165 | 24951165 | PRJNA745923_S_NODE_19440_length_223_cov_1.333333_g19108_i0 | PRJNA745923 | 19440 | 223 | 1.333333 | 2.97333259 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 412 | 7.88e-111 | NTclustered | gi|1818006880|gb|CP049225.1| | 147802 | g19108 | i0 | 100 | 18.0313901345291 | 223 | 0 | 100 | 0 | 1 | 223 | 508086 | 508308 | Lactobacillus iners strain C0059G1 chromosome, complete genome | blastn | 4021 | 412 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 24951508 | 24951508 | PRJNA745923_S_NODE_7520_length_386_cov_1.381924_g7188_i0 | PRJNA745923 | 7520 | 386 | 1.381924 | 5.33422664 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 708 | 0 | NTclustered | gi|1810931560|gb|CP048798.1| | 147802 | g7188 | i0 | 99.742 | 11.979274611399 | 387 | 0 | 100 | 1 | 1 | 386 | 155481 | 155867 | Lactobacillus iners strain KY chromosome, complete genome | blastn | 4624 | 708 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 26609358 | 26609358 | PRJNA745923_S_NODE_40521_length_150_cov_0.897196_g40189_i0 | PRJNA745923 | 40521 | 150 | 0.897196 | 1.345794 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 76.6 | 7.32e-15 | NR | MBR4989582.1 | 2485925 | g40189 | i0 | 91.1 | 1.8 | 45 | 4 | 90 | 0 | 148 | 14 | 293 | 337 | MBR4989582.1 ABC transporter permease [Oscillospiraceae bacterium] | diamond | 270 | 76.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 32044261 | 32044261 | PRJNA745923_S_NODE_18558_length_229_cov_2.322581_g18226_i0 | PRJNA745923 | 18558 | 229 | 2.322581 | 5.31871049 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 144 | 2.12e-39 | NR | RKW55286.1 | 1898203 | g18226 | i0 | 97.3 | 0.982532751091703 | 75 | 2 | 98.3 | 0 | 227 | 3 | 27 | 101 | RKW55286.1 MAG: pyrimidine-nucleoside phosphorylase [Lachnospiraceae bacterium] | diamond | 225 | 144 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 32360913 | 32360913 | PRJNA745923_S_NODE_27659_length_182_cov_1.920863_g27327_i0 | PRJNA745923 | 27659 | 182 | 1.920863 | 3.49597066 | [Clostridium] innocuum | 1522 | Bacteria | Bacteria | 42.4 | 0.0222 | NR | WP_233106945.1 | 1522 | g27327 | i0 | 41.5 | 0.675824175824176 | 41 | 24 | 67.6 | 0 | 47 | 169 | 69 | 109 | WP_233106945.1 isoaspartyl peptidase/L-asparaginase [[Clostridium] innocuum] | diamond | 123 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | [Clostridium] innocuum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;