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contig_metadata

21 rows where bioproject = "PRJNA745553" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 21 ✖

bioproject 1

  • PRJNA745553 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724230 724230 PRJNA745553_S_NODE_24901_length_248_cov_6.005714_g24706_i0 PRJNA745553 24901 248 6.005714 14.89417072 Methanothrix sp. 90426 Archaea Archaea 379 9.059999999999998e-101   NTclustered gi|2626216449|emb|OY821645.1| 90426 g24706 i0 98.605 33.4475806451613 215 1 86 2 14 227 826919 827132 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 8295 379 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
9652774 9652774 PRJNA745553_S_NODE_29348_length_220_cov_6.680272_g29153_i0 PRJNA745553 29348 220 6.680272 14.6965984 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 346 7.980000000000001e-91   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g29153 i0 99.474 40.7 190 1 86 0 20 209 1502698 1502887 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 8954 346 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
11402331 11402331 PRJNA745553_S_NODE_10449_length_375_cov_499.052980_g10254_i0 PRJNA745553 10449 375 499.05298 1871.448675 root 1 Root_unresolved Root_unresolved 654 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g10254 i0 98.133 262.149333333333 375 7 100 0 1 375 3116100 3115726 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 98306 654 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
11402372 11402372 PRJNA745553_S_NODE_1569_length_696_cov_5.388443_g1419_i0 PRJNA745553 1569 696 5.388443 37.50356328 Archaea 2157 Archaea Archaea 806 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g1419 i0 88.513 41.3419540229885 679 61 97 5 19 696 41493 40831 Uncultured crenarchaeote genomic fragment 54d9 blastn 28774 806 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16026875 16026875 PRJNA745553_S_NODE_26193_length_243_cov_2.264706_g25998_i0 PRJNA745553 26193 243 2.264706 5.50323558 Methanothrix sp. 90426 Archaea Archaea 252 2.01e-62   NTclustered gi|2626216449|emb|OY821645.1| 90426 g25998 i0 99.281 64.8230452674897 139 1 57 0 80 218 827246 827108 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 15752 252 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
18575703 18575703 PRJNA745553_S_NODE_11135_length_366_cov_3.928328_g10940_i0 PRJNA745553 11135 366 3.928328 14.37768048 Methanobrevibacter olleyae 294671 Archaea Archaea 379 1.3999999999999995e-100   NTclustered gi|998157363|gb|CP014265.1| 294671 g10940 i0 90.068 12.8770491803279 292 29 80 0 10 301 272201 272492 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 4713 379 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
18576033 18576033 PRJNA745553_S_NODE_3195_length_578_cov_4.132673_g3012_i0 PRJNA745553 3195 578 4.132673 23.88684994 archaeon 1906665 Archaea Archaea 243 2.43e-79   NR RYH06910.1 1906665 g3012 i0 86.6 0.695501730103806 134 18 69.6 0 13 414 29 162 RYH06910.1 MAG: hypothetical protein EON65_42320 [archaeon] diamond 402 243 1 Archaea               archaeon
19851190 19851190 PRJNA745553_S_NODE_19596_length_279_cov_5.417476_g19401_i0 PRJNA745553 19596 279 5.417476 15.11475804 Methanobrevibacter smithii 2173 Archaea Archaea 281 3.01e-71   NTclustered gi|2188913606|dbj|AP025587.1| 2173 g19401 i0 87.603 7.66666666666667 242 30 87 0 28 269 1003493 1003252 Methanobrevibacter smithii CE91-St68 DNA, complete genome blastn 2139 281 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
21600891 21600891 PRJNA745553_S_NODE_29617_length_215_cov_1863.718310_g29422_i0 PRJNA745553 29617 215 1863.71831 4006.9943665 root 1 Root_unresolved Root_unresolved 370 4.609999999999999e-98   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g29422 i0 97.674 247.804651162791 215 5 100 0 1 215 3115886 3116100 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 53278 370 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
23677279 23677279 PRJNA745553_S_NODE_25859_length_244_cov_5.538012_g25664_i0 PRJNA745553 25859 244 5.538012 13.51274928 uncultured crenarchaeote 29281 Archaea Archaea 350 6.969999999999998e-92   NTclustered gi|42557759|emb|AJ627422.1| 29281 g25664 i0 99.479 51.8893442622951 192 1 79 0 13 204 40363 40554 Uncultured crenarchaeote genomic fragment 54d9 blastn 12661 350 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23677375 23677375 PRJNA745553_S_NODE_3679_length_556_cov_2.453416_g3494_i0 PRJNA745553 3679 556 2.453416 13.64099296 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 614 5.569999999999999e-171   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g3494 i0 98.291 72.4622302158273 351 4 100 2 208 556 1085038 1085388 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 40289 614 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
28568578 28568578 PRJNA745553_S_NODE_13567_length_334_cov_1.475096_g13372_i0 PRJNA745553 13567 334 1.475096 4.92682064 archaeon 1906665 Archaea Archaea 60.1 2.58e-9   NR RYY81115.1 1906665 g13372 i0 75 0.323353293413174 36 9 32.3 0 3 110 44 79 RYY81115.1 MAG: hypothetical protein EON63_16150 [archaeon] diamond 108 60.1 1 Archaea               archaeon
29336445 29336445 PRJNA745553_S_NODE_23749_length_253_cov_8.283333_g23554_i0 PRJNA745553 23749 253 8.283333 20.95683249 Archaea 2157 Archaea Archaea 52 8.9e-6   NR AQS32407.1 115547 g23554 i0 39.3 2.65612648221344 56 34 66.4 0 252 85 27 82 AQS32407.1 hypothetical protein [uncultured archaeon] diamond 672 52.4 0.99236641221374 Archaea               uncultured archaeon
29831586 29831586 PRJNA745553_S_NODE_15151_length_316_cov_9.345679_g14956_i0 PRJNA745553 15151 316 9.345679 29.53234564 archaeon 1906665 Archaea Archaea 92.4 4.25e-22   NR RYG60021.1 1906665 g14956 i0 67.6 0.70253164556962 74 24 70.3 0 23 244 7 80 RYG60021.1 MAG: hypothetical protein EON64_19665 [archaeon] diamond 222 92.4 1 Archaea               archaeon
30052597 30052597 PRJNA745553_S_NODE_3651_length_557_cov_3.690083_g3466_i0 PRJNA745553 3651 557 3.690083 20.55376231 archaeon 1906665 Archaea Archaea 90.5 2.15e-17   NR RYG69029.1 1906665 g3466 i0 33.2 1.00718132854578 187 84 94.8 4 528 1 284 440 RYG69029.1 MAG: hypothetical protein EON64_03770, partial [archaeon] diamond 561 90.5 1 Archaea               archaeon
30242452 30242452 PRJNA745553_S_NODE_25252_length_247_cov_2.132184_g25057_i0 PRJNA745553 25252 247 2.132184 5.26649448 archaeon 1906665 Archaea Archaea 78.6 1.47e-15   NR RYH32308.1 1906665 g25057 i0 48.8 1.04453441295547 86 38 98.4 2 3 245 113 197 RYH32308.1 MAG: hypothetical protein EON65_00820 [archaeon] diamond 258 78.6 1 Archaea               archaeon
31474964 31474964 PRJNA745553_S_NODE_4316_length_529_cov_1.890351_g4126_i0 PRJNA745553 4316 529 1.890351 9.99995679 archaeon 1906665 Archaea Archaea 109 3.59e-24   NR RYH12605.1 1906665 g4126 i0 37.5 2.26843100189036 208 86 97.5 8 6 521 107 306 RYH12605.1 MAG: hypothetical protein EON65_37795 [archaeon] diamond 1200 109 1 Archaea               archaeon
31949171 31949171 PRJNA745553_S_NODE_10777_length_371_cov_2.298658_g10582_i0 PRJNA745553 10777 371 2.298658 8.52802118 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 55.8 4.05e-6   NR MBC7109063.1 1906667 g10582 i0 39 0.994609164420485 123 53 97.8 6 370 8 546 648 MBC7109063.1 hypothetical protein [Methanomassiliicoccales archaeon] diamond 369 55.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
32519116 32519116 PRJNA745553_S_NODE_7539_length_433_cov_2.780556_g7344_i0 PRJNA745553 7539 433 2.780556 12.03980748 archaeon 1906665 Archaea Archaea 142 1.72e-39   NR RYG68822.1 1906665 g7344 i0 82.1 0.540415704387991 78 14 54 0 22 255 119 196 RYG68822.1 MAG: glycosyl hydrolase family protein [archaeon] diamond 234 142 1 Archaea               archaeon
32654618 32654618 PRJNA745553_S_NODE_18240_length_289_cov_3.236111_g18045_i0 PRJNA745553 18240 289 3.236111 9.35236079 Haloferacaceae 1644056 Archaea Archaea 59.7 2.34e-8   NR WP_256394472.1 869891 g18045 i0 48.4 2.65743944636678 64 32 66.4 1 1 192 134 196 WP_256394472.1 ribonuclease HI [Halohasta litorea] diamond 768 59.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halohasta Halohasta litorea
32739636 32739636 PRJNA745553_S_NODE_4400_length_525_cov_6.962389_g4210_i0 PRJNA745553 4400 525 6.962389 36.55254225 Methanofastidiosum sp. 2666341 Archaea Archaea 103 6.029999999999999e-24   NR HNU62663.1 2666341 g4210 i0 96.2 0.297142857142857 52 2 29.7 0 151 306 139 190 HNU62663.1 hypothetical protein [Methanofastidiosum sp.] diamond 156 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;