RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA745553", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA745553 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11402372 11402372 PRJNA745553_S_NODE_1569_length_696_cov_5.388443_g1419_i0 PRJNA745553 1569 696 5.388443 37.50356328 Archaea 2157 Archaea Archaea 806 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g1419 i0 88.513 41.3419540229885 679 61 97 5 19 696 41493 40831 Uncultured crenarchaeote genomic fragment 54d9 blastn 28774 806 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23677279 23677279 PRJNA745553_S_NODE_25859_length_244_cov_5.538012_g25664_i0 PRJNA745553 25859 244 5.538012 13.51274928 uncultured crenarchaeote 29281 Archaea Archaea 350 6.969999999999998e-92   NTclustered gi|42557759|emb|AJ627422.1| 29281 g25664 i0 99.479 51.8893442622951 192 1 79 0 13 204 40363 40554 Uncultured crenarchaeote genomic fragment 54d9 blastn 12661 350 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;