RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA745553" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745553 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8377766 8377766 PRJNA745553_S_NODE_5847_length_477_cov_10.220297_g5653_i0 PRJNA745553 5847 477 10.220297 48.75081669 Encephalitozoon romaleae 571949 Fungi Fungi 86.1 4.58e-12   NTclustered gi|210076707|gb|FJ026013.1| 571949 g5653 i0 84.884 0.180293501048218 86 11 18 2 303 386 615 530 Encephalitozoon sp. SJ-2008 16S small subunit ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S large subunit ribosomal RNA gene, partial sequence blastn 86 86.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon romaleae
19050486 19050486 PRJNA745553_S_NODE_4855_length_509_cov_2.346330_g4663_i0 PRJNA745553 4855 509 2.34633 11.9428197 Fungi 4751 Fungi Fungi 196 2.17e-45   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g4663 i0 95.902 42.4950884086444 122 4 47 1 227 348 5657 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21630 196 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;