RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA745553" and tax_phylum = "Kinorhyncha"

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tax_superkingdom 1

tax_phylum 1

  • Kinorhyncha · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745553 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25425198 25425198 PRJNA745553_S_NODE_11720_length_358_cov_2.161404_g11525_i0 PRJNA745553 11720 358 2.161404 7.73782632 Kinorhyncha 51516 Kinorhyncha other_Eukaryota 158 6.98e-34   NTclustered gi|471434505|dbj|AB738367.1| 1215696 g11525 i0 86.713 37.8687150837989 143 17 40 2 205 346 2196 2055 Zelinkaderes sp. HY 2012 gene for 28S ribosomal RNA, partial sequence blastn 13557 158 1 Eukaryota Opisthokonta Metazoa Kinorhyncha Cyclorhagida Kentrorhagata Zelinkaderidae Zelinkaderes Zelinkaderes sp. HY 2012

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;