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contig_metadata

18 rows where bioproject = "PRJNA745553" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724391 724391 PRJNA745553_S_NODE_6361_length_462_cov_12.125964_g6167_i0 PRJNA745553 6361 462 12.125964 56.02195368 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 640 7.529999999999999e-179   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g6167 i0 92.793 19.8852813852814 444 29 96 3 1 442 2502 2060 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9187 640 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
724441 724441 PRJNA745553_S_NODE_8841_length_405_cov_7.439759_g8646_i0 PRJNA745553 8841 405 7.439759 30.13102395 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 645 1.3999999999999996e-180   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g8646 i0 96.883 7.97777777777778 385 12 95 0 1 385 2323 1939 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3231 645 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3275351 3275351 PRJNA745553_S_NODE_11503_length_361_cov_1.791667_g11308_i0 PRJNA745553 11503 361 1.791667 6.46791787 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 193 1.93e-44   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g11308 i0 93.75 33.9556786703601 128 8 35 0 69 196 3852 3979 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12258 193 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
8377706 8377706 PRJNA745553_S_NODE_3127_length_581_cov_7.120079_g2944_i0 PRJNA745553 3127 581 7.120079 41.36765899 Acrasis kona 1008807 Heterolobosea other_Eukaryota 224 5.35e-72   NR KAL0490819.1 1008807 g2944 i0 73.2 1.55421686746988 149 39 76.9 1 80 526 6 153 KAL0490819.1 nucleoside diphosphate kinase [Acrasis kona] diamond 903 224 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
9652754 9652754 PRJNA745553_S_NODE_28548_length_229_cov_2.467949_g28353_i0 PRJNA745553 28548 229 2.467949 5.65160321 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 171 5.41e-38   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g28353 i0 80.786 100.375545851528 229 34 100 4 1 229 3162 3380 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22986 171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
9652858 9652858 PRJNA745553_S_NODE_5668_length_482_cov_8.418093_g5474_i0 PRJNA745553 5668 482 8.418093 40.57520826 Acrasis kona 1008807 Heterolobosea other_Eukaryota 244 1.14e-80   NR KAL0489640.1 1008807 g5474 i0 93.1 0.809128630705394 130 9 80.9 0 424 35 1 130 KAL0489640.1 ribosomal protein S22 [Acrasis kona] diamond 390 244 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
10127351 10127351 PRJNA745553_S_NODE_25388_length_246_cov_6.739884_g25193_i0 PRJNA745553 25388 246 6.739884 16.58011464 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 333 7.089999999999999e-87   NTclustered gi|198250379|gb|EU696948.1| 556273 g25193 i0 99.454 69.7154471544715 183 1 93 0 63 245 685 503 Allovahlkampfia spelaea strain SK1 18S ribosomal RNA gene, complete sequence blastn 17150 333 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia spelaea
13477840 13477840 PRJNA745553_S_NODE_1171_length_741_cov_6.880240_g1048_i0 PRJNA745553 1171 741 6.88024 50.9825784 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1122 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g1048 i0 94.407 21.7031039136302 733 36 99 5 10 741 3772 4500 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16082 1122 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13952721 13952721 PRJNA745553_S_NODE_9131_length_400_cov_1.920489_g8936_i0 PRJNA745553 9131 400 1.920489 7.681956 Naegleria 5761 Heterolobosea other_Eukaryota 695 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g8936 i0 98.721 65.535 391 5 98 0 1 391 3130 3520 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 26214 695 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15227173 15227173 PRJNA745553_S_NODE_20732_length_272_cov_0.773869_g20537_i0 PRJNA745553 20732 272 0.773869 2.10492368 Tetramitus 5768 Heterolobosea other_Eukaryota 460 3.5e-125   NTclustered gi|2874368077|gb|PQ819801.1| 74084 g20537 i0 100 65.7867647058823 249 0 92 0 24 272 687 935 Tetramitus aberdonicus strain CCAP 1588/4 small subunit ribosomal RNA gene, partial sequence blastn 17894 460 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus aberdonicus
15227244 15227244 PRJNA745553_S_NODE_6072_length_471_cov_1.595477_g5878_i0 PRJNA745553 6072 471 1.595477 7.51469667 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 702 0   NTclustered gi|407750695|gb|JX441981.1| 1237086 g5878 i0 94.156 28.2951167728238 462 26 98 1 1 462 413 873 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 13327 708 0.991525423728814 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
28537316 28537316 PRJNA745553_S_NODE_3627_length_558_cov_4.402062_g3442_i0 PRJNA745553 3627 558 4.402062 24.56350596 Acrasis kona 1008807 Heterolobosea other_Eukaryota 193 2.15e-57   NR KAL0478644.1 1008807 g3442 i0 54.6 0.935483870967742 174 66 93.5 2 2 523 163 323 KAL0478644.1 prostaglandin E synthase [Acrasis kona] diamond 522 193 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30400783 30400783 PRJNA745553_S_NODE_2933_length_592_cov_3.468208_g2751_i0 PRJNA745553 2933 592 3.468208 20.53179136 Acrasis kona 1008807 Heterolobosea other_Eukaryota 224 1.34e-71   NR KAL0490810.1 1008807 g2751 i0 57.4 0.856418918918919 169 72 85.6 0 25 531 7 175 KAL0490810.1 catalase-peroxidase [Acrasis kona] diamond 507 224 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30495215 30495215 PRJNA745553_S_NODE_2313_length_630_cov_6.175943_g2137_i0 PRJNA745553 2313 630 6.175943 38.9084409 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 239 2.08e-75   NR AHW50664.1 5763 g2137 i0 54 1.9047619047619 200 88 95.2 1 13 612 118 313 AHW50664.1 cathepsin B-like protein [Naegleria fowleri] diamond 1200 239 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31221580 31221580 PRJNA745553_S_NODE_7135_length_443_cov_3.240541_g6941_i0 PRJNA745553 7135 443 3.240541 14.35559663 Acrasis kona 1008807 Heterolobosea other_Eukaryota 202 6.75e-63   NR KAL0491555.1 1008807 g6941 i0 67.6 0.961625282167043 142 46 96.2 0 9 434 77 218 KAL0491555.1 adenylyl cyclase-associated protein CAP2 [Acrasis kona] diamond 426 202 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31316685 31316685 PRJNA745553_S_NODE_12655_length_345_cov_10.147059_g12460_i0 PRJNA745553 12655 345 10.147059 35.00735355 Acrasis kona 1008807 Heterolobosea other_Eukaryota 53.9 1.32e-5   NR KAL0491757.1 1008807 g12460 i0 63.4 0.356521739130435 41 15 35.7 0 345 223 306 346 KAL0491757.1 cyclase-associated protein 1 [Acrasis kona] diamond 123 53.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31453331 31453331 PRJNA745553_S_NODE_6656_length_455_cov_2.777487_g6462_i0 PRJNA745553 6656 455 2.777487 12.63756585 Naegleria 5761 Heterolobosea other_Eukaryota 50.8 2.65e-4   NR XP_002676363.1 5762 g6462 i0 30.6 1.50989010989011 108 70 69.2 3 410 96 85 190 XP_002676363.1 uncharacterized protein NAEGRDRAFT_80003 [Naegleria gruberi] diamond 687 50.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31822619 31822619 PRJNA745553_S_NODE_9877_length_385_cov_8.951923_g9682_i0 PRJNA745553 9877 385 8.951923 34.46490355 Acrasis kona 1008807 Heterolobosea other_Eukaryota 153 2.01e-43   NR KAL0488965.1 1008807 g9682 i0 61.2 0.903896103896104 116 45 90.4 0 23 370 132 247 KAL0488965.1 Ras-related protein Rac [Acrasis kona] diamond 348 153 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;