contig_metadata
5 rows where bioproject = "PRJNA745553" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4552758 | 4552758 | PRJNA745553_S_NODE_23924_length_252_cov_11.648045_g23729_i0 | PRJNA745553 | 23924 | 252 | 11.648045 | 29.3530734 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 411 | 3.269999999999999e-110 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g23729 | i0 | 99.556 | 85.7698412698413 | 225 | 1 | 89 | 0 | 5 | 229 | 605 | 381 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 21614 | 411 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 7103141 | 7103141 | PRJNA745553_S_NODE_8406_length_414_cov_4.260997_g8211_i0 | PRJNA745553 | 8406 | 414 | 4.260997 | 17.64052758 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 361 | 5.8199999999999987e-95 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g8211 | i0 | 85.596 | 145.642512077295 | 361 | 33 | 84 | 15 | 55 | 403 | 655015 | 655368 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 60296 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 14752976 | 14752976 | PRJNA745553_S_NODE_14772_length_320_cov_4.866397_g14577_i0 | PRJNA745553 | 14772 | 320 | 4.866397 | 15.5724704 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 555 | 1.8799999999999998e-153 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g14577 | i0 | 99.67 | 161.865625 | 303 | 1 | 95 | 0 | 18 | 320 | 882 | 580 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 51797 | 555 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 17302300 | 17302300 | PRJNA745553_S_NODE_22714_length_259_cov_13.784946_g22519_i0 | PRJNA745553 | 22714 | 259 | 13.784946 | 35.70301014 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 327 | 3.5e-85 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g22519 | i0 | 92.889 | 77.6409266409266 | 225 | 16 | 87 | 0 | 13 | 237 | 1881694 | 1881918 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 20109 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 32613521 | 32613521 | PRJNA745553_S_NODE_27880_length_233_cov_5.800000_g27685_i0 | PRJNA745553 | 27880 | 233 | 5.8 | 13.514 | Chlamydia trachomatis | 813 | Bacteria | Bacteria | 56.6 | 2.52e-8 | NR | CRH76625.1 | 813 | g27685 | i0 | 50.7 | 0.862660944206009 | 67 | 24 | 79.8 | 2 | 228 | 43 | 29 | 91 | CRH76625.1 Uncharacterised protein [Chlamydia trachomatis] | diamond | 201 | 56.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia trachomatis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;